Pseudochaenichthys georgianus (South Georgia icefish): 117450557
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Entry
117450557 CDS
T09629
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117450557 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117450557 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117450557 (grin2ca)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
117450557 (grin2ca)
BRITE hierarchy
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117450557
NCBI-ProteinID:
XP_033944273
EnsemblRapid:
ENSPGEG00000002170
LinkDB
All DBs
Position
8:complement(7986460..8078096)
Genome browser
AA seq
1411 aa
AA seq
DB search
MGVRLGCLSDSPWWPPPLLLLLFFTVPFCSGRPFGVPTPAVNVAVVFSGSAYQTEIKGRL
SRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQILDF
ISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVITS
LYPGYETYVDHVKSFTDTSYFIWDLQDVLTFDMSADGMNDLRAGRLLQQVDAQVLLVYCS
HEEAQYLFRMASEAGLVGPGYIWIIPSLAMGNPDMPPPESFPVGLISIITDRWRMSLRKR
VRDGVAIVVKGVQSFQTQRGFVPEGQSDCHNPVKPSASNDTLFRHMLNVTWEHKDFSFNN
NGYLVNPAMTIITLDRERQWDKVGTFEMGILQMRYPVWPRYGTYLEPVSDYRHLTVATLE
ERPFVIVEAVDPMTGTCVSNTVPCRRQSNKTESIVGHTEPYTKLCCKGFCIDTLKKLSRT
IKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVE
TGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFIFEYCSPVGYNRSLVT
AKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLA
AFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQ
KGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSR
WKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGL
SLLVFSWEHLLYWKLRHSVRESERLDFLLAISRGIYSCFSGVEHTDHNGSLQTPDVTTNY
TQANMLKMLKTAKDMVSSARVENSLDNATKTIEHWSRRGGDNVRVGLPPRVTTTDMAHCR
LPYISSISDNHSQYPQRALTPTFPIHYGDSSTQPLLEKPRMVSRPTLLRYTLPSRNSQHV
LERTLPISSLSSPHIAIRDPVTPGTSNPHHSSRLYVENPARHPTSPFVPYREFQVPDIYV
DRGPLRRKFSYPPDCVSRKRRTHSYVFDAADPRARVDYDEPRSCLAELRANHLLNNHAPV
GAATGCTAGHYPGTSKSCNSCMKSYLEPEMEDVPLLGKDKLNRRASFLKATWGNDRIHQV
DETKPSTSASSARVDMPDLFPRVVVANPKPHKLYGSLGHNLSCYPLAAEPAYLDPAHMGS
YPYKQKLKYCESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPLAQ
GPPQFYDSSKDMCHLFPCTSHCPDNAAMMPRMSDRQVVYHNNMFGPYDGSGKRETPGSGS
RERRQVLVGRRVNSPYVPKPWGRVSSLESEV
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgcttgagcgactccccgtggtggccgccgccgctgctgctg
ctgctgttcttcactgtgcccttctgctcaggccggcctttcggagttcccactcccgct
gtgaacgtggcggtggtgttcagtggctcggcctaccagacggaaattaaagggcggttg
agccgggaaaacttcatggacctgcctcttgaagtgaaccccatcactgtgctggtcaac
aacacaaacccacgggcactgctaacccgcatctgtgacaccctctccaccaaccgcgtc
catggagtggtgttcgaggacaacgttggctctgaggccgtggcccagatcttggacttc
atttccactcagacggcagtccccatcgtgggcatcagcggaggctctgctgttgtcctg
ccttacaagggcgagggctccaacttcctgcagctgggatcctccatcgagcagcagatc
aacggcatgttcaaggtgatggaggagtacaactgggacagcttcgtagtcatcaccagc
ctctacccaggctacgaaacctacgtggatcatgttaaatctttcaccgacaccagctac
ttcatatgggacctgcaggacgtgcttaccttcgacatgtctgctgatggcatgaacgac
ctacgtgcaggaaggctgctgcaacaggtcgacgcccaggtgctgttggtgtactgctcc
catgaagaggctcagtacctgttcagaatggcgtcagaggccggactggttgggccgggt
tatatctggattatccccagcctggcaatggggaacccagacatgcccccgcctgaaagc
ttccctgtggggctcatcagcatcatcacagaccggtggaggatgagcctgaggaagagg
gtgcgggacggggtggctatcgtggtgaagggcgtgcagagctttcagacacagaggggc
ttcgttcccgagggccaaagtgactgtcacaacccggtcaagccatctgctagtaatgac
actctgttcaggcacatgttgaatgtaacctgggaacacaaggacttctccttcaacaat
aacggttacctggtgaatccagccatgacaataatcactttggacagagagagacagtgg
gacaaggtggggaccttcgagatggggattctgcaaatgagataccccgtgtggccgcgg
tatggcacttacttggagccagtgtcggactacaggcatctgacagtggctacgctggag
gagaggccctttgtcattgtggaggcagtggaccctatgactggtacatgcgtcagcaac
actgtaccctgcagacgacagtccaacaagacggagtccattgtgggtcacactgagccg
tacactaagctgtgctgtaaaggcttctgcattgacaccctgaagaagttgtcccgcact
atcaagttctcctacgacctctacctggtcaccaatggcaagcacggcaagctggtccga
ggcatttggaatgggatgatcggagaggtattctacaagcgggccgacatggccattggc
tcgttgaccataaacgaagagcgctcagagattatagacttctcagtgccctttgtggag
acggggatcagtgtgatggtggcccgaagtaatgggactgtctcaccatctgccttttta
gaaccatacagtccagctgtgtgggtgatgatgttcgtcatgtgtctcactgttgtggcc
atcacagtcttcatatttgaatactgcagtccagttggatacaaccgcagcctggtcact
gctaaagatcccggaggtcccaccttcactattgggaagtctgtgtggctgctgtgggga
atcgttttcaacaactcggtccccattgagaatccaaagggcaccactagtaagatcatg
gtcctggtttgggccttcttcgctgtcatcttcctggcttcctacacagccaacctggca
gccttcatgatccaggagcaatacatcgacacggtctccggactcagtgacaaaaagttt
caaaagccacaggagcagtaccctccgttccgctttggtacggtcccaaatggaagcaca
gagcgcaacataaggagtaactaccccgagatgcactcccacatggtcaaatacaaccag
aagggagtagaggatgccctgaacagcctcaaaacagggaaactggatgcctttatctac
gatgctgctgtgctgaattacatggctggcaaagatgagggttgcaagctggtgaccatt
ggcagtgggaaagtgtttgccaccactggttatggcatcgccctgcagaaggactcacgc
tggaaacgaccaattgatctggccctgctccagttcctggctgatggcgacactcagaag
ctgcagaccgtctggctcacaggcatctgccgtaatgagaagaaagaggtgatgagcagc
aagctggacattgacaacatggcgggggtcttctacatgctgcttgtggccatgggcctg
agcctgctggttttctcctgggaacatctgctctactggaaactacgacattcagtccgc
gaatcagagcgcctggacttccttttagctatcagcagaggtatctacagctgcttcagt
ggagtagagcatactgaccacaatgggagcttacagactccggacgtcactaccaactat
acacaagccaatatgctaaaaatgctgaagacagccaaggacatggtgtcctctgccaga
gtggagaactctctagataatgccaccaaaacaatagagcactggagcaggcgggggggc
gacaatgtgcgggttggcctgccacctagagttacaaccacagacatggctcattgtcgt
ctgccgtatatctccagcatctcagacaaccactcacaataccctcagagagccctcaca
cccacgtttccaattcattatggggactcctccacccagccactcctggagaagcccagg
atggtgagccgacccaccctgctgcgatatacgcttcccagccgcaacagtcagcatgtc
ttagagaggactctgcccatctccagcctcagcagtcctcacatcgccattcgggaccct
gttacccctggtacttctaacccccaccacagcagcaggctgtatgtggaaaacccggcc
cggcaccccacgtcaccttttgttccttacagagagttccaggtgcccgatatctacgta
gatagaggaccactgaggaggaagttcagctacccccctgactgtgtgagccggaagagg
cggacccatagctatgtgtttgatgctgcagatcccagagccagagttgactacgatgaa
cctcggtcctgccttgctgagttgagggccaatcacctccttaacaaccatgcccctgtg
ggtgctgccactggctgcactgcgggacattatccaggcaccagcaaaagttgcaactcc
tgtatgaagtcctatctggagcctgaaatggaagatgtaccactcctggggaaggacaaa
ctcaaccgtcgcgcctcgttcctcaaagcaacatggggcaatgacaggatccatcaggta
gatgaaacaaagccctcaacatctgcatcctccgcccgtgtagacatgcctgaccttttt
cctcgggtggtagtggccaacccaaagccccacaagctatatggcagtctggggcacaac
ctgtcctgctaccccttggctgctgagcctgcttacttggacccggcacatatgggatcc
tacccctacaagcagaagctcaagtactgtgagtccacccggctgccctcttacagggaa
gccatcctgcagaatgccgctgccctgcgccgctcctcctccacagtggtgcacagacac
tactccacctacctgaactcgtacacagacttaccggtgtatgtagggccacttgcccag
ggaccgccccagttctatgacagttccaaggacatgtgtcacttgtttccctgtacaagt
cactgcccagataacgcagcaatgatgcctcgtatgagcgacaggcaggtggtttaccac
aacaatatgtttgggccctacgatggttcagggaagagggaaaccccaggctctgggagc
agagagcggaggcaggtgttggtggggcgcagagtcaacagtccctatgtgccaaagccc
tggggcagggtatccagcctggagtctgaggtctga
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integrated database retrieval system
