Pseudochaenichthys georgianus (South Georgia icefish): 117450762
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Entry
117450762 CDS
T09629
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03008
Ribosome biogenesis in eukaryotes
pgeo03013
Nucleocytoplasmic transport
pgeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117450762 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
117450762 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117450762 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117450762 (xpo1a)
03009 Ribosome biogenesis [BR:
pgeo03009
]
117450762 (xpo1a)
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117450762 (xpo1a)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117450762 (xpo1a)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117450762 (xpo1a)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117450762 (xpo1a)
Pre-60S particles
117450762 (xpo1a)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117450762 (xpo1a)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117450762 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
Motif
Other DBs
NCBI-GeneID:
117450762
NCBI-ProteinID:
XP_033944598
EnsemblRapid:
ENSPGEG00000006189
LinkDB
All DBs
Position
1:44521927..44555544
Genome browser
AA seq
1066 aa
AA seq
DB search
MPAEMTMLADHPARQLLDFTQKLDINLLDNVVNSMHHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSSIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNQFTLTMGQLKQMLPL
NTNIRVAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRNNLRESLMEALHFMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLIVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIAAQTDQAVQELLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVAAAREPEVLSTMATIVNKLGSHLTGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAS
SPTNNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgaaatgacgatgttggccgatcacccagccagacagctgctggacttcact
cagaagctggacatcaacctgctggataatgttgtcaactccatgcaccatgacattgga
tcacagcaaagagtggcccaggaagttctcacaaacctcaaggaccacccagacgcctgg
acccgggtcgacaccatcctggagttctcccagaatatgaaaacaaaatattacgcactg
cagattctggagacggtcatcaaaacacgctggaaaattcttcctagaaatcagtgtgaa
ggtatcaagaagtatgttgttgggttgatcattaagacgtcctctgatcctgcaaacatg
gagaaagagggagtctacatttcaaaactcaacatgatcctcgtacagatcctgaaacag
gaatggcccaaacactggccgactttcatcagtgacatcgtgggtgcgagtcggaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagcgaggaggtctttgac
ttctccagcggacagatgacccaggtgaaggccaagcacctcaaagacagcatgtgcaac
gagttctcctccatattccagctgtgccagtttgtgatggaaaactcccagaatgcaccg
ctggtccacgccacactggagaccctgctccgcttcctgaattggattcctttaggttac
atcttcgagaccaagctcatcagcactctggtctacaagttcttgaacgttcccatgttt
cgcaacgtcacgctgaaatgtttgacagagatcgccggcgtgagcgtcaaccagtacgag
gagcaatttgtcaaccagttcaccctcaccatgggccagcttaaacagatgctgcctttg
aacaccaacatccgagtggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcacgttcctcaaagaacacggacagctcatcgagaagagg
aacaacctgagggagtcgctcatggaggcgctgcacttcatgctgctggtgtcggaagtg
gaggagacggagatctttaagatctgtctggagtactggaaccacttggcagccgagctc
tacagagagagtccgttctccacctccagcaccccgctgctgtccgacgtgcccccccgc
agacacctctacctgcccgtgctctcacaggtgcgtctgctgatggtgagccgcatggcc
aaaccagaggaggtgctgattgtggagaacgatcagggcgaggtggtgcgggaattcatg
aaggacacggactccattaacctttacaagaacatgagggagactctcgtgtatctgacc
catctggactacgctgacactgaacgcatcatgacggagaagctgcacaaccaggtgaac
ggcaccgagtggtcgtggagaaacctgaacatgctctgctgggccatcggctccatcagc
ggggcgatgcacgaggaggacgagaagaggttcctggtcaccgtcatcaaggacctgctg
gggttgtgtgagcagaaaagagggaaagacaacaaggccatcatagcgtcgaacatcatg
tacatcgtgggtcagtatcctcgcttcctccgagctcactggaagttcctcaagaccgtc
gtcaacaagctgtttgagttcatgcacgagacccacgatggagtgcaggacatggcgtgt
gacaccttcatcaagatcgcccagaagtgccggcgtcattttgttcaggtccaggttgga
gaggtgatgcccttcatcgacgagatcctcaacaacatcaacaccatcatctgcgacctg
cagccacagcaggtgcacacgttttacgaggcggtcggctacatgatcgccgctcagaca
gaccaggcggtccaggagcttctgatcgagaagtacatgctgctgcccaaccaggtgtgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgcggagacggtg
cgccagctgggcagcatcctgaagaccaacgtgcgcgcctgtaaagccgtgggccatccg
ttcgtcgtgcagctggggcggatctacctggacatgctcaacgtctacaagtgtctgagt
gagaacatctcctccgctgtccagaccaacggcgagatggtgaccaagcagcctctgatc
aggagcatgaggacggtgaagagagaaactctgaagctgatctcgggctgggtcagtcgc
tccaacgaccctcagatggtgggagagaacttcgtgccccccctgctggaggcggtgctc
atcgactatcagaggaacgtcgccgccgcccgggagcctgaggtcctcagcaccatggca
accatcgtcaacaagctgggatcccacctgacgggagaaatccccaaaatcttcgacgct
gtcttcgagtgcactttgaacatgatcaacaaggactttgaggagttccccgaacacaga
acacacttcttctaccttcttcaagccgccacctcgcagtgtttccccgccttcctctcc
atcgccccggctcagttcaaactcatcctggactccatcatctgggccttcaaacacacc
atgaggaacgtggccgacacgggtctccagatcctctacactctgctgcagaacgtgtcc
ggagaggaggcggccgcgcagagcttctaccagacgtacttctgtgacatcctgcagcac
atcttctctgtggtcaccgacacctctcacactgcagggctgacgatgcacgccaccatc
ctggcctacatgttcaacctggtggaggaggggaaggtcagcgtggctctgagcgcctcc
agccccacaaacaaccaggcgcacgtgcaggagtacatcgccaacctgctgaagaccgcc
ttccctcacctgcaggacgcccaggtgaaggtgtttgtgacgggtctgttcagcctgaat
caggacatccccgccttcaaggagcacctgagggacttcctcgtgcagatcaaagagttt
gctggcgaggacacgacagacctgttcctggaggagagggaaacgtctctgcgccaggcc
caggaggagaaacacaagctgcagatgtcggtgcccggcatcctcaaccctcacgagatc
ccggaggagatgtgcgactga
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