Pseudochaenichthys georgianus (South Georgia icefish): 117451463
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Entry
117451463 CDS
T09629
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117451463
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117451463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117451463
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
117451463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Spt20_SEP
TERB2
Med3
TFIIA
Motif
Other DBs
NCBI-GeneID:
117451463
NCBI-ProteinID:
XP_033945674
EnsemblRapid:
ENSPGEG00000006314
LinkDB
All DBs
Position
8:32859163..32966933
Genome browser
AA seq
1498 aa
AA seq
DB search
MFFQFGPSIEQQASVMLNIMKAYDWYIFSIVTTYYPGYQDFVTKIRSTIENSFVGWELEE
VILLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEANTIFEVSHSVGITGYGYTWIVPSL
VAGDTIVVPAEFPTGLLSVSYDEWDYNLEARVRDGVAIITMATSTMMMDRGPHTLLKSEC
HGAPDKKTPISGNPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWERVGK
WENGSLSMKYHVWPRYELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPC
RKQLKTLNETKDSGIYIKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKKINGTWNG
MVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSA
DVWVMMFVMLLLVSAMAVFIFEYFSPVGYNHCLADGREPHGPSFTIGKAIWLLWGLVFNN
SVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSPND
FSPPFRFGTVPNGSTERNIRNNYPEMHAYMTKFHQKNVNEALGSLKAGKLDAFIYDAAVL
NYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKESLWKRHVDLAILMLFGDGEMEELESLW
LTGICHHEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGTCSG
QPGFVFSISRGIWSCIHGVQIEEKSNSSALNSPSATMNNTHSNIMRLLRTAKNMASLSGV
NGSPHSALDFIRRESSVYDISEHRRSLAGHSDCKAPYPPEDNMFSDYISEVERTFGNLHL
KDSNLYQDHYLHHHGSTLGLNGPPPPRPHSLGSASSLEGGMFDCESIGGGVAPIFTTQPC
SALTHRNMSKFDLLSGQTPPSGQSFKGGLPDLYGKFSFKGGASSSTFIPGHGYCGGRGDD
DGNMDRRSDVSDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIELGYRRK
PYHISHHHYHGHRSASPPLLPPERKRGLSGNSDGNYMFREKESVRDFYLDQFRPKEGVPQ
WEHVDLTEGPGSRDGGNCTTLVPVDDFLKQSKPKKSDLKSGVAGSGLAGGEWECRNCRAS
GGGKQMSMHGGVYGGGMSCGTSGGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQ
MGGGNGVGGGGGVMGPQSQGQQRRKSGGLGKPLRRQHSYDAFVDLQKEESGGMGSLMGLG
GVGGGMGSQVMGGMLPPPRSVSLKEKERYMEGTSPFAHIFERHGGSERERERDRDPLFYE
GRKRPGSPFGLFRGDGLHRRSIGERDMRDRDRSLMEGGGGGGFSLSKSLYPDRVNQNPFI
PTFGDDQCLMHGAKQYYMKKQQQQQQQQQQQQQQQQQQQQQVPKPSRSDFRSQMSTTSYL
PASATAGVMSNVTPRFPKELSLGGMNHHGSMLGVGPQRPFNGSNGHVYEKLSSIESDV
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcaattcggcccgtccatcgagcagcaggcctcggtcatgctgaacatcatg
aaggcttacgactggtacatcttctccatcgtcaccacgtactacccggggtaccaggac
tttgtcaccaagatccgtagcaccatcgagaacagctttgtgggctgggagctggaggag
gtcatactgctcgacatgtccgtggatgacggagattcaaagatccagaaccagctgaag
aagctccagagccccgtcatcctcctctactgcacaaaggaggaggccaacaccatcttc
gaggtgtcgcactctgtcgggatcaccggatacggctacacatggatagtgccctcgctg
gtagctggagacactattgtagtgcctgcagagttcccgacaggtctgctttctgtgtcc
tacgacgagtgggactacaacctggaggcccgtgttcgtgacggcgtggccatcatcacc
atggcaacgtccaccatgatgatggaccgcgggccgcacaccctgctgaagtccgagtgc
cacggagctccggacaagaagacccccatctcaggcaaccccaacgaagtgctcaggtac
ctgatgaatgtgacgttcgaggggcgtaatctgtcgttcagcgaagacggataccagatg
caccccaagctagtcatcattctgctcaacaaggagaggcagtgggagagggtgggtaaa
tgggagaacggttccctgtccatgaagtaccacgtgtggcctcgttatgaactgtatggc
ggggccgcaaccagggaggacgaccacctgtccatcgtgactctggaggaagctcccttc
gtcatcgtggaagacgtggatccgctcagcgggacctgcatgaggaacaccgtgccctgc
cggaaacagttaaaaacactcaatgaaacgaaggactctgggatctacataaagcgctgc
tgtaagggattctgcatcgacatcctgaagaagatcgccaagcaggtgaagttcacctac
gacctttacctggtgaccaacggcaagcacggaaagaagatcaacggcacgtggaacggc
atggtgggagaggtggtgttgaagaacgctcacatggccgtcggctccttgacgatcaac
gaggagaggtcggaggtcatcgacttctccgtccccttcatcgagacgggcatcagcgtc
atggtctccaggagcaacggcaccgtgtcgccctccgccttcttagagcccttcagtgcg
gatgtgtgggtgatgatgttcgtgatgctgttgctggtgtcagcaatggctgtgtttata
ttcgagtacttcagccccgtgggctacaaccactgtctggctgacggcagagagcctcac
ggtccgtccttcaccatcggtaaggccatctggctgctgtggggtctcgtgttcaacaac
tccgtgcccgtgcagaaccccaaaggcaccaccagtaagatcatggtgtcggtgtgggcc
ttcttcgccgtcatcttcctcgcctcctacactgccaacctggccgccttcatgatccag
gaggagtacgtggaccaggtgaccggcctctccgacaaaaagttccagagcccaaacgac
ttctcgcctccgttccggttcggcaccgtcccgaacggcagcacggagaggaacatcagg
aacaactatccggagatgcacgcatacatgaccaagtttcatcagaagaacgtcaacgaa
gctctggggagtctgaaggccggcaaactagacgctttcatttacgacgcggccgtgctg
aactacatggccggtcgggatgagggctgtaagctggtgaccatcggcagcggatacata
ttcgccaccacggggtacggcatcgccatccagaaggagtcgctttggaagaggcacgtc
gacctggccatcctgatgctctttggagacggtgagatggaggagctggagtcgctctgg
ctgacgggaatctgccaccacgagaagaacgaggtgatgtccagtcagctggatattgac
aacatggcgggtgttttctacatgctgggcgccgccatggctctgtcgctcatcaccttc
atctgcgagcactggttctactggcagctgcgcttctgcttcatgggaacctgctccgga
cagccgggcttcgtcttctccatcagcaggggcatctggagctgcatccacggggtgcag
atcgaggagaagagcaacagctcggcgttgaactctccatccgccaccatgaacaacacc
cactccaacatcatgcgcctcctacgaaccgccaagaacatggcgtccctgtccggagtg
aacggatcgccccacagcgcgctggacttcatccgccgcgaatcctccgtctacgacatc
tccgaacaccggcgcagcttggcgggacactcggactgcaaggcgccgtacccaccggaa
gacaacatgttcagcgactacatcagcgaggtggagaggacgtttggtaatctccacctg
aaggacagcaacctgtaccaggatcactacctgcaccaccacggctcgacgctagggctc
aacggaccgccgccgcccaggcctcatagcttgggtagcgcaagttctctggaagggggg
atgtttgattgtgagagcattggaggaggggtggcgcctattttcaccacccagccctgc
tcggcattgacccacaggaacatgagcaagtttgatttgctgtccggacaaactcctccc
tcagggcagagctttaagggaggcttgccggacctttacgggaagttttcctttaaggga
ggcgcctcaagctccacgtttatccccgggcacggatactgcggaggaagaggagacgac
gatgggaacatggatcgacggtcggacgtctcggatatatccacgcacacggtgacttac
ggaaacctggagggtaacgccaagaaacgcaaacagtaccgcgatagcctgaaaaaaagg
ccggcctctgccaagtccagacgggagctggacgagatcgagctgggctaccggaggaaa
ccctaccacatcagccaccatcactaccacggccaccgctccgcctccccaccgctgctg
cccccagaacggaagagaggcttaagtgggaacagcgacgggaactacatgttcagagag
aaggaaagcgttagggatttctatttggaccagtttcggcccaaagagggcgttcctcag
tgggaacatgtggacctgacggaaggccctgggagtagagatggaggcaactgcaccacc
ctggttccagtggatgactttcttaagcaaagcaaacccaaaaagtcagatttaaagagt
ggtgtggcaggatctgggctggcagggggagagtgggagtgcaggaactgtcgggctagc
ggaggaggcaagcagatgtcgatgcacggtggtgtgtacggtggtggtatgagctgtggg
acttcgggaggcggaggtaacagccgcccaagctctgcgacctgcatgcgctgcgagggt
tgtaaaaagacaggaaacctctacgatatcagcgaggacaacaaccacctcttggaacag
atggggggagggaatggcgttggtgggggaggtggagttatgggccctcaatctcagggc
cagcagaggaggaagagcggaggactcgggaagccactgaggcggcagcactcatacgac
gcttttgttgaccttcagaaagaggagtcgggcgggatgggtagtttaatgggtctggga
ggtgttggggggggaatggggagccaagttatgggagggatgctgcccccacccaggagc
gttagcttgaaggagaaagagcgctacatggagggtaccagccccttcgcacacatattc
gagcgccacgggggctcggagagagaacgggaacgagacagggacccgttgttttacgag
ggtcgcaaacgacccggatcaccgttcggtttgttcagaggcgacggccttcaccgccgc
tccatcggagagagagacatgcgagacagggacaggtctctgatggagggaggaggcggg
ggagggttctctttatccaaatctctttacccagacagggtcaaccaaaacccctttata
cccacctttggcgacgaccagtgtctgatgcacggagccaaacaatattacatgaaaaag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
caagttcccaaaccaagccgaagtgacttcaggagccagatgagcacgacgtcatatctg
ccggcgtccgccacggccggggtgatgtccaacgtgacgccccggttcccaaaagagctc
agcctcggtgggatgaaccaccacggctccatgctgggggtcggcccccagcgtcccttc
aatggaagcaatggccatgtgtacgagaaactgtccagcattgagtctgacgtgtga
DBGET
integrated database retrieval system
