Pseudochaenichthys georgianus (South Georgia icefish): 117453157
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Entry
117453157 CDS
T09629
Symbol
prdm6
Name
(RefSeq) LOW QUALITY PROTEIN: putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00310
Lysine degradation
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117453157 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117453157 (prdm6)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117453157 (prdm6)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
117453157 (prdm6)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117453157 (prdm6)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117453157 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
117453157
NCBI-ProteinID:
XP_033947944
EnsemblRapid:
ENSPGEG00000015393
LinkDB
All DBs
Position
9:8126404..8259565
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AA seq
647 aa
AA seq
DB search
MLKPGEPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLAPLPPPDRLSMPMDSLRQSRLHSH
LLASSHCTSSSSSTASSTLSSSVAGAALTPSSSISISTSAGISQLPVPQQIALFGQALAP
LCGGGGGGGGGGGGGGGGGGGGGGGGGGDLMMVVPPENRQGHNPMAGLLHQAKELSCGGV
GVVSSSVKSSCGGEEGGKGASARFKLTSEELDYYLYGQQRMEIIPLSNHTGEVNNRCDMC
ADNRNGECPMHGPLHSLRRLVGTSSSTPAPVXMPDVPDWLRDLPREVCLCTSTVPGLGYG
ICASQRIPQGTWIGPFQGVPLLLDKLHSGAVRNSRHLWEIYDAEGTLQHFIDGNDPSKSS
WMRYIRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCVAQ
DENLNVPATVVEAMTRQESLQSFSKNGKPSSSSSSSSSTPSTAHMRSMVFPHSPCPRNFS
LLDKVGVGLSSDSSFGQLGLKNQRVLASPTSTSQLSSDFSDWHLWKCGQCFKTFTQRILL
QMHVCPQNPDRPYQCGHCSQSFSQPSDLRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHI
RTHTGEKPFKCERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccaggtgagcccagtggctcggccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcaggcgcagctgaaggctcctctggcccccctgcct
ccacctgaccgcctctccatgcccatggacagcctgcgtcagtcccgcctgcacagccac
ctcctggcctcttcgcactgcacctcctcttcttcttctacggcctcctcaacgctttcg
tcttcagtagctggagcagctctcaccccgtcctcctccatctccatctccacctcggcg
gggatctcccagctacccgtcccccagcagatcgcactctttgggcaggcgttggcccct
ttgtgtggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggaggaggaggaggagacctcatgatggtggtgcccccggagaaccggcag
ggtcacaatccgatggcggggcttctccatcaggccaaagagctgagctgcgggggggtc
ggggtggtgtcatccagtgtgaagagcagctgtggaggagaggagggcggaaaaggagcg
tcggccaggttcaagctcacgtcagaggagctggactactacctgtacggacagcagagg
atggagatcatccctctgagcaaccacacaggagaggtcaacaaccgttgtgacatgtgt
gcagacaacaggaacggcgagtgtccgatgcacgggcccctccactctctgcggcgcctc
gtcggcaccagcagcagcacgccggctcccgtcncgatgcccgacgtccctgattggctc
agagacctgcccagagaggtgtgtctgtgcaccagtacagttcccgggctgggttatggg
atctgcgcgtctcagaggatccctcaggggacctggatcggccccttccagggagtccca
ctgctgctggacaaactgcactctggagccgtcaggaacagcagacacctgtgggagatc
tacgatgcagaagggacgttacagcactttatcgatggtaatgatcccagtaagtccagc
tggatgaggtatatccgctgtgcccggcactgtggggagcagaacatgatggtggtccag
tacaggtcctgtatcttctacagagcgtgtatggatatccccagaggaacagagctgctg
gtttggtacaatgactcctacacttccttcttcggaatccccctgcagtgcgtcgctcag
gatgaaaacttaaacgtcccagccacagtggtagaagcgatgaccaggcaggagtccctt
caatccttcagcaagaacggcaaaccttcctcctcctcgtcttcctcttcgtccaccccc
tccaccgcacacatgcgctccatggtcttcccccattccccttgtccaaggaatttctcc
ctgttagacaaggttggggttgggctttcctcggactccagtttcggccagttggggtta
aagaaccagcgagtcctggcaagcccgacctccaccagccagctgagcagtgacttcagc
gactggcacctgtggaagtgtggccagtgcttcaaaaccttcacccagaggatcctgctg
cagatgcacgtgtgtccgcagaatccagacagaccgtaccagtgtggccactgctcccag
tccttctctcagccatcagatttgaggaaccacgtggtgacacactcaagcgaccgaccc
ttcaaatgtggatactgcggtcgtgcgttcgctggcgccacaacgctcaacaaccacatc
cgcacgcacaccggggagaagccgttcaagtgcgagcgttgcgaccgcagcttcacacag
gccactcagctcagccgccaccagcgactccccaacgagtgcaaacctgtgaatgagagc
agcgagtccatcgaggtggactaa
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