Pseudochaenichthys georgianus (South Georgia icefish): 117456664
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Entry
117456664 CDS
T09629
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00310
Lysine degradation
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117456664 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117456664 (setd1ba)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117456664 (setd1ba)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117456664 (setd1ba)
HMT complexes
COMPASS/SET1 complex
117456664 (setd1ba)
COMPASS/SET1 complex (yeast)
117456664 (setd1ba)
BRITE hierarchy
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
117456664
NCBI-ProteinID:
XP_033952494
EnsemblRapid:
ENSPGEG00000006491
LinkDB
All DBs
Position
12:complement(18285968..18308125)
Genome browser
AA seq
1800 aa
AA seq
DB search
MSKPGEKYRLNEDHGRKQSSSLANGMDSHPGCGSAEKRGHHCRSYKLIIDPALKKGSHKL
YRYDGLTFNMPNPGMPPVDMVRDPRIGRLWTKYKETDLPVPTFKIDECYIGDVPPKEVTF
ARLNDNIREGFLSDMCKKFGEIEHVEILYNPKNKKHLGIAKVVFENVKAAKVAVQSLHKT
SVMGNFIHVELDPKGENRLRYFQLLMNGSYTPLTLPVGGEEVREVSPRSLAEALLACEPI
RRLSESSVSAAGGALPPSSSTTPLSQETGYSSLRQDTPQSQGTPHTPRQTGTPFSQDSNF
SSRQSTPAYQSSRAENSGSYKSRRHESKFQDAYNRRPERPKYRSNMFRGNTSDQAPFKQH
QLTPPEPPPSTPTFTYTAPPPATPNFKSAFSPYQAPLPPAFPPSEPAFHHPAQREGEYLR
PPQPPPAAATDFLPVKERPETPPIPEPPPEPVPHPTTPPPQTPEHCPSPGSPTLDLERNS
LDSRIEMLLKEKKTKLPFLEERDSDSEVRMEGSPISSSSSQLSPIPPYTGGQQNSRPCST
GLEDISPTPLPDSEDEEPIPGTASLIKRISSPLSEKMSNSDLNDRHFRCHTPTDQMETGH
QSSGEDMEISDDEMPGTPIEGAECKGIVMNSAVSEMQTIALPPPYLQHQSGYQLSHHHLP
PHSAVPGHPHLTGVPHHMLHPMGPFAHSMMPLVQMELMNCLRWEQWSTVPMSFQMQQQML
SRMAQTRGPFPYPHYIDSGASGPYAAPYVPLSMGATPASDAAAAAPAAPGQEWQNPSIPT
FNPTVPPPGYDTKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDDWWEK
KEHSAKVSLTPVKGVEGKEEDKPKPKETMGSSLLENWNKGEGLGYEGMGLGISLRGAIRL
PSFKVKRKDPPDAAAAGDSKRARPSTPVDDELEDEDRDRDQAELPNDDSKLDADAAVAKR
RPSRPLDLDSEGEEELDTSGKEEESLSDREEEPEETQDGLSSGKASGDEEGDDEDSSSES
ASSDSSDDEAVSSASSKASSASSAESADSSEYELSSEEEGEEEEEGDELVSARGSEAKGK
VTSSSSSSSSTSSSDEEAKAETKAPSSPSGPPPEEKEERRSKEELSSKVKRRPPSPEEEV
TEDLKPPSPKVKQQDIPVVKSEPQEPVAVLRPPTPTGTLPDSDQETKAKGKAEPEEVSCI
PDRLPQCPVDANRPLPKSVSASVMHLPLPPHPAVEGRSLLHPPPGPLPDFPQRPRLPTDE
DLPRTPGRDLTERARSLGKSQSTDTMPNTPGSEAPLTGSSLLLSSPHIPGSPFSYPAQSP
VLSAGVPRTPGRDLTFTPVFPDPTALTFNRKISSESLDDRPVFKEPPVSALPNQSAELSA
SVPEDLPTGLTVDVPVPLDTATSKRKLGRPKGKKTFSELSNDHLPHDADLGDLSTQTITA
HSPDRPGLIFQEEDVKPKTVLPSTDSFYEEKPPVVVKPARRARRGWGELLLETLSPVTSP
PRPYFSPRSEFEEMTILYDIWNEGIDEEDVRLLQITYDKMLQQDNGNDWLNDTLWVNHPA
TNIPRIKKRRRDDGMRDHMTGCARSEGYYKIDKKDKIKYLQSSKLQSEEPPFDTQGMSIP
AQVHASTRAGSERRSEQRRLLSSFACDSDLLKFNQLKFRKKKIRFCRSGIHDWGLFALEP
IAADEMVIEYVGQNIRQVIADMREKRYEEEGIGSSYMFRVDHDTIIDATKCGNFARFINH
SCNPNCYAKVITVESQKKIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccaggggagaaatacagattgaacgaagaccatggcagaaagcagagttca
agtttggcgaacggcatggacagtcatcccggctgcggctcggcggagaagcggggccac
cactgcagaagttacaagttgatcatcgacccggcgttgaagaagggatcccacaaactg
tatcgctacgatgggctgactttcaacatgcccaaccccgggatgcccccggtggacatg
gtccgagacccgaggattggtcgtctctggactaaatacaaagagaccgacctcccggtg
ccgacatttaagatcgatgagtgttatatcggcgatgtgcctcccaaggaggtgacattc
gccaggctgaacgacaacatcagggaaggatttcttagcgacatgtgcaaaaaatttgga
gaaatcgagcacgtcgagatcttgtacaatccgaagaataagaagcacctggggattgct
aaagttgtttttgagaacgtgaaagccgccaaagtggctgtgcagtcgcttcacaagacg
tctgttatgggaaacttcatccacgtggagctggacccgaaaggtgagaatcgcctcagg
tacttccagctcctgatgaatggcagctacaccccgctgaccctgcctgttggtggggag
gaggtcagagaagtctcccctcgcagcctggcagaagccttactggcctgcgagcccatc
cgcaggttgtcggagagcagtgtgtctgctgctggaggagcgttgccacccagcagctcc
accactcctctgtcccaggagacgggctactccagcctgaggcaggacaccccccagtcc
cagggaacccctcacaccccgcggcagactggcacgccgttctctcaagactccaatttc
tccagtcggcagtccaccccagcgtaccagtcgagccgggccgagaactccggaagttac
aaatctcgcagacatgagagtaagttccaggatgcgtacaaccgcagaccggagaggcct
aagtaccgcagcaacatgttccggggtaacacgtcggatcaggctcccttcaaacagcac
caactcaccccacctgaacctccaccttccacccccaccttcacatacacagcgcctccc
cctgctacgcccaacttcaaatccgctttctcgccttatcaggctcctttgccccccgcg
ttccccccgtcggagcctgctttccatcacccagcccagagggagggggagtacctccga
cctccgcagccgcctcccgcagctgccactgactttttgcccgtcaaggagaggccagaa
actcctccgatcccagagcccccaccggagcccgttccccatccgaccacccctcctcct
caaaccccagagcactgcccctcacctggctcccccacactggacctagagcgcaatagc
ctggattctcgcattgagatgctcctaaaggagaaaaagacaaaactgccgttcctggag
gagcgagactcggattcggaggtgcggatggaggggagtcccatctcctcctcgtcctct
cagctatccccaattcccccttacacagggggccagcaaaactcccgtccctgtagcaca
ggcctggaggatatcagcccgaccccactgccagactcggaagatgaagagccaattccc
ggaactgcctccctgatcaagagaatcagttctcctctctcggagaagatgagcaacagt
gacctcaacgataggcattttcgatgccacactccgactgatcaaatggaaacgggtcac
cagtcgtcaggggaggacatggagatctctgacgacgagatgcccgggacccccatcgag
ggtgcagaatgtaaaggcatcgtcatgaactctgctgtgtcggagatgcagaccattgcc
ctccctccgccctacctccagcaccagtccggataccaactctcccatcaccacctgccg
cctcactctgccgtcccgggacaccctcacctcaccggtgtgcctcaccacatgctacac
cccatgggcccctttgctcacagcatgatgcccctggtgcagatggagctgatgaactgc
ctgcggtgggagcagtggagcaccgtgcccatgtccttccagatgcagcagcagatgttg
agtcgcatggctcagactcgagggccctttccttatccacactatatagacagtggtgct
tcggggccgtacgctgcgccctacgtgcctctgtctatgggtgctacgcctgctagcgat
gcagcagcagcagcaccagcagcacccggacaggaatggcagaatcccagtataccaacg
tttaaccctactgttcctcctcctggatatgatactaaaaaggaggacccccacaaggcc
actgttgacggtgtgctgctggtcattgtcaaggagctgaaggccatcatgaagagggac
ctcaaccggaaaatggtggaggtggtggctttcagagcctttgatgactggtgggaaaag
aaggagcactctgcaaaggtatctttgactccagtgaagggtgtggaggggaaggaggaa
gataaacccaaacctaaagagacgatgggttcaagtctgctggaaaactggaacaagggc
gaggggctgggctatgagggaatgggcttgggaatcagtttacggggggccatccgcctg
ccctccttcaaggtgaagaggaaggacccgcctgacgctgccgcagcaggagacagcaag
cgagcccgaccctccactccagtggatgacgaactggaggatgaagaccgggatcgagac
caagccgagctccccaacgacgattccaaactggacgccgatgctgcagtggcgaaaaga
cggccctcgaggccactggacctggacagcgagggagaggaggagctggacacctcaggg
aaggaagaggagtcgttgtctgacagggaggaggagcctgaggaaactcaggacgggctg
tcgtcaggcaaagcgagtggcgacgaggagggtgatgatgaagactcttccagtgaaagc
gcttcctcagattcatctgatgacgaagccgtgagctcggcctcctccaaggccagctcc
gcctcctcggctgaaagcgcagactcctctgagtacgagttgagctcagaagaggagggg
gaagaggaggaggaaggggatgagctggtgtcagcacgaggttcggaggctaaaggaaaa
gtgacctcttcctcctcttcgtcctcatcaacatcgtcgtctgatgaagaggcgaaggca
gagaccaaggcaccaagctctccttcggggccgccaccagaggagaaggaggagcggagg
agcaaggaggagctgagcagtaaagtcaaacgcagaccccccagtcctgaggaggaggtg
acggaggacctgaagcctccctcacccaaagtcaaacagcaagacattcccgtagtgaag
tctgaacctcaggagcccgtagcagtccttcggcccccgacccccaccgggaccctgccc
gacagcgaccaggagacgaaagccaaaggtaaagcagagcctgaagaagtatcctgcatc
ccggatagattaccccaatgccccgtagatgctaaccgacccctccccaaatctgtctca
gcatctgtaatgcacctccctctccctcctcacccggcagtagaaggtcgttccctcctc
caccctccccctggtcccctccctgacttcccccagcggcccaggctccccacagacgag
gacctcccccgcacgccgggtagagacctgacggagcgggcccgaagtctgggcaagtcc
cagagcacagacacgatgcccaacacccccggcagtgaggcccccctgacgggcagcagc
ctgttgctcagctcccctcacatccccggtagtcccttctcctaccctgcacaatccccc
gtcctgagtgctggagtcccccgcactccaggaagagatttaaccttcactcctgtcttc
cctgaccccacagcactgactttcaataggaaaatatcctctgagagcctggatgacaga
cctgttttcaaggagccccccgtcagcgccctgcccaaccagtcagcagagctttcagcc
agcgtccctgaagacctgcccacgggtctcaccgtggacgtcccggtgccattagacacc
gcaacatccaagaggaaacttggtcgacccaaaggcaagaagaccttctctgagttgtca
aatgatcatctaccccatgatgcagatctgggagatctatccacacagacgatcacggcc
cactcccctgaccggccgggcctgatcttccaggaagaagacgtgaagcctaagacagtc
ctgccttccacagacagcttctacgaagaaaaaccaccagtggtcgtgaaacctgcgcga
agggctcgacgaggctggggggagctgctgctagagaccctgtcccccgtcacctcgccc
ccccggccgtacttcagcccgcgctccgagtttgaagaaatgaccatcctgtacgacatc
tggaacgaaggcatcgatgaagaagacgtacggctcctgcagatcacttacgacaagatg
ctccagcaggataacggcaacgactggctcaacgacacgctctgggtcaaccatcctgct
accaacatcccaagaataaagaaaaggagaagagacgacggcatgagggatcacatgacc
ggctgcgcccggagtgaaggatactacaagatcgacaagaaggacaagatcaagtacctt
cagagctcaaagctgcagtcagaggagccgccgttcgacacacaggggatgagtattcct
gcccaggtccacgcctccaccagagctggctctgagcggcggtcggagcagcgccgcctg
ctgtcctcgttcgcatgtgacagcgaccttctgaagttcaaccagttaaagttccgtaag
aagaagatcagattctgcaggtcaggcatccacgactggggtctgtttgctctggagccc
atcgctgctgatgagatggtgatcgagtacgtgggacagaacatccgacaggtgattgcg
gacatgcgggagaagcgctacgaggaggaaggcatcgggagcagctacatgttccgcgtc
gaccacgacaccatcatagatgctaccaagtgtggcaacttcgcccgcttcatcaaccac
agctgcaatcccaattgttacgcaaaggtcatcactgtggaatctcaaaagaagattgtg
atctactccaggcagcccattaacgtcaacgaggagatcacctacgattacaaattcccc
atcgaggacgagaagatcccctgtttgtgtggggcggagaactgcaggggaacgctgaat
taa
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integrated database retrieval system
