Pseudochaenichthys georgianus (South Georgia icefish): 117458563
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Entry
117458563 CDS
T09629
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00780
Biotin metabolism
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
117458563 (hlcs)
Enzymes [BR:
pgeo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
117458563 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
117458563 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
117458563 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
117458563 (hlcs)
BRITE hierarchy
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
ABC_transp_aux
Motif
Other DBs
NCBI-GeneID:
117458563
NCBI-ProteinID:
XP_033955028
EnsemblRapid:
ENSPGEG00000023543
LinkDB
All DBs
Position
14:33403960..33441173
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AA seq
907 aa
AA seq
DB search
MLITLCYVYLWVRFNKCYSVLIRNSLCRLNSSSFSFGFRLCSSPASATSPTGAPNPPPPE
DNVFLQLGDRAVYVTEPQACDDLSKWTVLLGSSLVCGPRIENISFIIEATGHRVGYRSPH
TSNQKVLKWSDYCRPLACSPGQPFRAVAQASVDNFSRLGVAFIEDRLQLDNGLKPSKIIP
VLLQESTLSELWEKQCPKTDTFPHTGGGAAERRPPSDHQLLQCPKGSLLLPPEVKRRLEE
RRGSEPLRGSKDLGVACDQEDRSLGNYLHMEGHKHHLHLSSCHECLELENSTILSVKYAS
AENIPDLPDDDSGGLGSGGETLDDVEPDGGFSGLSDCKSKPPNLLLYTGGCPKRYEAVRQ
LISECVDMENYIIYPLQPQQALSDPWLENTRLLVLAEEEALTPQLQTRFLTYLSQGGRVL
GLASTLCPAGLCLEARERRRGQVSRLSFTREDSTELQLSVLASEKVYIRDTQGGGEVELW
GELKGDSPHQRDMVVVRVTHGGDGGEAVLCQAHLEIAPDSQNVPPEGFDELKVSNALRYE
VLTEILTSLGLSCELSQTPPPSPVHLLATSQEAKASFVNWLQTRADQKGLLKSSNASLKM
VSCSELQDAPSLPDGSLALVTNSSEAQSWPQFSMETYSKNLKSSVLGHTLLYAEVATSTM
DLLQGLTLHLPKDVGLIAIAGRQIQGRGRGGNAWLSPPGCAMFTLSLQVALSSRLGQRIP
FLQHLVALAVVEAVRSLPGYQDLDLRVKWPNDIYYGSLMKLGGVLVTSTVIGSTFHLLIG
CGFNVTNSNPTVCINDLIQQHNAQQGCSLPPLCCAQIIARSVSFLEALICSFQQGGPDAV
LPTYYKRWLHSGTRVRLWSEDGVEAEVVGLDHNGFLQVLSKEQGVVSVEPDGNSFDMLKN
LVVIKQR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacgctgtgctatgtctatctgtgggtgcgctttaacaagtgctactcggtg
ctcatccgcaacagcctgtgcagactgaacagcagcagcttcagcttcggcttcagactt
tgttccagcccggcctcagcaacttctccgaccggagcacccaacccgcctcctcccgag
gacaacgtcttcctccagctgggggacagggccgtctatgtcacggagcctcaggcatgt
gatgacctcagcaaatggaccgtgctgttgggctcctctctggtttgtggtccacgcata
gagaatatttcattcatcatagaggcgacaggacacagagtgggctaccgttctcctcac
acatccaatcagaaagtgctgaagtggtctgactactgccgccctctggcctgcagccct
gggcagcccttcagagcggtggcccaggccagcgtggataacttcagtcgtctgggagtg
gctttcattgaagaccgccttcagctggacaacgggcttaagccttccaagataatccct
gtcctgctccaagaatccactctcagtgaactgtgggagaagcagtgtccaaagactgac
actttcccccacactggagggggtgctgctgagcgccgtcccccgtcagaccaccagctc
ctccagtgccctaaaggcagcctgctcctccccccggaggtgaagaggaggctggaggag
cgccgcgggtcggagccgctcagagggagcaaggacctgggagtcgcctgtgaccaggag
gaccgctccctggggaattatctccacatggagggccacaagcaccacctccacctgtcc
agctgccacgagtgtttggagctggagaacagcaccatcctctctgtcaaatacgcctca
gccgagaacattccagaccttcctgatgatgactcaggcgggctcgggagtggaggtgag
actttggatgatgtggagcccgatggaggattttctgggctgagtgactgtaaaagcaaa
cctccgaatctcctgctgtacacggggggttgcccaaagcgctatgaagccgtgcgccag
ctgatatcggagtgtgtagacatggaaaactacataatatatcccctccaaccgcagcag
gctctgagcgacccctggctggagaacaccaggctcctggttctggccgaggaggaagct
ctcaccccccagctgcagacccgttttctcacctacctgagccaggggggcagggtgttg
ggtctggcctccaccctgtgccctgcaggcctgtgtctggaggcccgggagaggcggcgg
gggcaggtgagccggctgagcttcacccgggaggacagcacggagctgcagctcagcgtg
ctggccagcgagaaggtctacatcagggacactcagggagggggtgaggtggagctgtgg
ggggagctgaaaggagacagcccccatcagagggatatggttgttgtcagggtaacccac
ggaggagatggtggagaagctgtcctctgtcaggcacatctggaaattgctcctgactcc
cagaatgtaccacctgaaggttttgatgagctgaaggtcagcaatgcgctgcgttatgaa
gtcctgacagagatcctcacctctctgggcctcagctgtgagctcagccagacccccccc
ccaagcccagtccacctgctggccacctctcaggaggccaaggccagctttgtgaattgg
ctgcagacacgtgcggaccagaagggtctccttaaatcatccaacgcctccctaaagatg
gtgtcctgctctgagctccaggatgctccttcgctgcctgatggctctctggccctggtc
accaactcttcagaggcccagagctggcctcagttcagtatggagacctacagtaagaac
ctgaagagcagcgtgctgggacacaccctgctgtacgccgaggtcgccacgtccaccatg
gacctgctacaaggtctgactctgcacttaccaaaggacgtgggtttgatagcgatagct
ggtcgacagatccagggcagaggtcggggggggaacgcctggctcagccccccggggtgc
gccatgttcaccctgtccctgcaggtggcgctgagctccaggctggggcagaggatcccc
ttcctgcagcatctggtggctctggcggtggtggaggctgttcgctcacttcctggatac
caggatttagacctgagggtgaagtggcccaatgacatctactacggtagcctgatgaag
ctcgggggggttctggtgacttccacggtgataggatcaacgtttcatctgctcataggc
tgtgggttcaacgtgaccaacagtaaccccacggtgtgcatcaacgacctgatccagcag
cacaacgcccagcagggctgcagcctgcccccgctctgctgcgctcagatcatcgcccgc
agcgtcagcttcctggaggccctcatctgcagcttccaacaggggggccccgacgccgtg
ctgcccacctactacaagagatggctgcatagcgggacccgggtgcggctctggagcgag
gacggggtggaggcggaggtggtcggcctggaccacaacggcttcctgcaggtgctcagc
aaggagcagggcgtggtgtcagtggagcccgatgggaactccttcgacatgctgaagaac
ctggtggtcatcaagcagcgttag
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