Pseudochaenichthys georgianus (South Georgia icefish): 117459560
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Entry
117459560 CDS
T09629
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03008
Ribosome biogenesis in eukaryotes
pgeo03013
Nucleocytoplasmic transport
pgeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117459560 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
117459560 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117459560 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117459560 (xpo1b)
03009 Ribosome biogenesis [BR:
pgeo03009
]
117459560 (xpo1b)
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117459560 (xpo1b)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117459560 (xpo1b)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117459560 (xpo1b)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117459560 (xpo1b)
Pre-60S particles
117459560 (xpo1b)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117459560 (xpo1b)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117459560 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
117459560
NCBI-ProteinID:
XP_033956325
EnsemblRapid:
ENSPGEG00000013714
LinkDB
All DBs
Position
15:complement(13636547..13674236)
Genome browser
AA seq
1070 aa
AA seq
DB search
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCIHHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
FPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITT
VLNPSSPNNQGFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQ
IKEFAGEDTTDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaattggatatcaacctgctggataacgtggtgaactgtatacatcatggggtggga
ccacagcaaagaatggcacaagaagtgttgacacacctaaaagagcatccggatgcctgg
accagagtggacaccatcctcgagttctcccagaacatgaacaccaaatactatgctctt
cagattctggaaacggttatcaaaacaagatggaagattcttcccaggaatcagtgtgaa
ggtataaaaaagtatgttgttggtctcattatcaagacttcatcagatgcatcaaatgtg
gagaaagaaaaggtgtacattggaaagctgaacatgatccttgttcagatcctgaaacag
gagtggcccaagcactggcccaccttcatcagcgacattgtcggggcgagtcgcacgagc
gagagcctctgtcagaacaacatggtcatcctcaagctgctcagcgaagaggtctttgat
ttctccagcggccagatgacccaggtcaaggcaaagcatctaaaagacagcatgtgcaac
gagttctcccagatattccagctgtgtcagtttgttatggaaaattcccagaatgcccct
ctggtccacgccactctggagaccctcctacgttttctcaactggattcctcttgggtac
atctttgaaaccaaactgatcagcacattggtgtataagttcttgaacgtgcccatgttt
cgcaacgtgactctgaagtgcctcacagagattgccggtgtgagcgtgagtcagtacgag
gagcagtttgtcacactcttcaccttgaccatgtgtcaactcaaacagatgctgcctctg
aacactaacattcgtctggcctacgccaacgggaaagacgatgagcagaacttcatccag
aacctcagtctgttcctctgtacgttcctgaaggagcacgggcagctcatcgagaagcgg
ctcaacctccgagaaacattaatggaggccctccactacatgctgctggtgtcggaggtg
gaggagactgagatctttaaaatttgtctcgagtattggaaccacttggctgctgagctg
tacagagagagtcccttctccacgtcaacgtcccccctgctctccggcaaccagcacttt
gacgtgccccctcgcagacagctctacctgcctgtactctccaaggtgcgtctgcttatg
gtaagtcggatggccaagccggaggaggtgttggtggtggagaacgaccagggagaggtg
gtcagagagttcatgaaggacaccgactccatcaacctctacaagaacatgagggaaact
ctggtgtacctcactcatctggactatgcagacacagagcgcatcatgacagagaagctg
cacaaccaggtgaacggcaccgagtggtcctggaagaacctcaacacgctgtgctgggcc
atcggctccatcagcggggccatgcacgaggaggacgagaagaggttcctggtcaccgta
atcaaggatctcctgggtctttgcgagcagaagagagggaaggacaacaaggccatcatc
gcctccaacatcatgtacatcgtcggccagtatcctcgcttcctcagagcacactggaag
ttcctcaaaaccgtcgtcaacaaactctttgagttcatgcatgagacccatgacggagtt
caggacatggcctgtgacacgttcattaaaatcgcccagaagtgccggcgccactttatc
caggtgcaggtgggagaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgcgaccttcagcctcagcaggtgcacacgttctacgaggcagtaggttatatg
atcggagcccagacagatcagacagttcaggagcacctgatagaaaaatacatgctgctt
ccaaaccaggtgtgggacagcatcatccagcaggccaccaagaacgtggacatcctgaag
gacccggagactgtgaagcagctgggcagcatcctgaagaccaacgtgcgggcctgtaag
gccgtgggacaccccttcgtcatccagctggggcggatctacctggacatgctcaacgtc
tacaagtgcctcagtgagaacatctcagccgccattcagacaaatggtgagatggtgacg
aagcagcccttgatccggagcatgaggacagtgaagcgggagactctgaaactgatctca
ggctgggtcagccgatcaaacgacccccagatggtcggcgagaactttgttcctccgctg
ctggacgccgtcctcatcgattaccaacgcaacgtccccgctgcccgggagcccgaggtc
ctcagcaccatggcaaccattgtaaacaagctgggcggacacatcaccagtgagatccca
cagatcttcgatgccgtcttcgagtgcaccctaaacatgatcaacaagaactttgaggag
ttcccggagcacaggactcacttcttctacttactccaagcggtgaactctcactgcttc
cctgcattcctcgccatccccccggcacagttcaagctggtgctggactccatcatctgg
gccttcaaacacaccatgaggaacgtggctgacactggtctgcagatcctgtacacgctg
ctgcagaacgtggcccaggaggaggcggccgcgcagagcttctaccagacgtacttctgt
gacatcctgcagcacatcttctccgtggtcaccgacacgtcacacaccgctggcctcacc
atgcacgcctccatcctggcctacatgttcaacctggtggaggaagggaagatcaccacg
gtgctgaaccccagcagccccaacaaccagggcttcatccaggagtacgtggccaacctg
ctgaagaccgccttcccccacctacaggatgcgcaggtgaaggtgtttgtgacggggctg
ttcagcctgaaccaggatatccccgccttcaaggagcacctcagggacttcctcgtgcag
atcaaggagtttgcgggcgaggacaccacggacctgttcctggaggagagggaggcgtcg
ctgcggcaggcccaggaggagaagcacaagatccagatgtcggtgccgggcatcctgaac
cctcacgagatccccgaggagatgtgcgactga
DBGET
integrated database retrieval system
