Pseudochaenichthys georgianus (South Georgia icefish): 117459847
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Entry
117459847 CDS
T09629
Symbol
polr1b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117459847 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117459847 (polr1b)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117459847 (polr1b)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117459847 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
117459847
NCBI-ProteinID:
XP_033956888
EnsemblRapid:
ENSPGEG00000019240
LinkDB
All DBs
Position
15:complement(9442089..9473272)
Genome browser
AA seq
1144 aa
AA seq
DB search
MDSSTKWNNLPKAPSLKNLTERGFGILNETQHAAVQDLTKAHIESFDQALTDGLSRVVQA
IPPLEFTFRNDRISLAFVEATLYSPVVAKGNICREMKVFPAECRGRRCTYKGKLVADVSW
SINGIPKGIIKQSMGQVPIMVKSKLCNLHGLSPKKLVEHHEESEEMGGYFIVNGNEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVKEEHTAVNMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKSREDNSFYKSCASEMLRMVMEEGCTTRSKV
LNYLGERFRVKMNLPEWYTNDQCANYLLDESICIHLKSGMEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFMKEKMSAWLLSVKLSFEKRGSRLSAVWTAENVIKIF
NMGTDLTKPFEYLLATGNLSSKTGLGMMQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVAPTLPTTSLPALLCSLGVT
PVDGTPGKAYADCYPVLLDGAVVGWVEAELAPVVVDSLRMFKVLKEKKIPPWTEIVLVPK
TGKASMYPGVFLFTTPCRMVRPVRNLALGKQELIGTFEQLYINVGIMEDEIEPGVTTHQE
LFPHSMLSVVASFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFLDRSDNKLYRLQTPQSP
MVRPCMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIINKSSWXRGFAHGSIYKTELVD
LAEKVRGEDSVVFGVKPGDPKVNDKLDADGLPFIGSTLQYGDPFYGYINLNTGQTSVNFY
TVGFNGLIIWQKSQEACVVDNIKVCSNDTGTGRLSASASMRVPRNPTIGDKFASRHGQKG
ILSRLWPAEDMPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFT
FSEESSALEYFGEMLRAGGYNYYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQ
VRTTGARDKVTNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCV
DCGSLLSPLLEKPPPYWSSMRNRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVK
LDIK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggactcttcaacaaagtggaataatttgcctaaagctccgagtctaaagaacctgaca
gagaggggcttcgggatcctgaacgagactcagcatgccgcggtgcaggacctgaccaaa
gcccacatcgagtccttcgaccaggctctgactgatggactgagccgcgtcgtgcaggcc
atccctcccttggagttcacgttcaggaatgacaggatcagcttggcgtttgtggaggcc
actctctacagcccggtggtcgccaagggcaacatctgcagggagatgaaggtgtttcct
gctgagtgcagggggaggagatgcacatacaaagggaagctagtggcggacgtcagctgg
tcaatcaacggaatccccaaaggcatcatcaaacagtccatgggtcaggtgcccatcatg
gtgaagtccaagctgtgcaacctgcacggcttgtcccccaaaaagctggtggagcaccat
gaagaatcagaggaaatgggaggctatttcattgtaaatggaaatgagaaggttatccgt
atgctgatcatgccgaggaggaactatcccatcgccatgtcgagacccaagtggaagagc
agggggcagggatacactcagtatggtatttcaatgcgctgcgtgaaggaagagcacacg
gccgtcaacatgaaccttcactatctggaaaacgggacggtgatgctgaacttcatctac
cagaaagagctcttcttcctcccactaggctttgctcttaaggccctggtggacttcact
gactttcagatataccaggagctgatcaagagccgcgaggacaattcattttacaaaagc
tgtgcgtcggagatgctgcgcatggtcatggaggaggggtgcaccacccgcagcaaggtg
ctgaactacctgggggagcgcttcagggtgaagatgaacctgccggagtggtacacaaac
gaccagtgtgccaactacctgctggacgagagcatctgtatccacctgaagtcgggcatg
gagaagttctacctgctgtgtctgatgaccaggaagctcttcacgttcgccaagcaggag
tgcatggaggagaaccccgacagcatcatgtgtcaggaggtgctcacccctgggcagctc
tacctcatgttcatgaaggagaagatgtctgcctggttgctgtctgtgaagctctccttt
gagaagagaggcagccgactgagcgcagtgtggaccgctgaaaacgtgatcaagatattc
aacatgggcacggacttgaccaaaccctttgagtatctgctggccactgggaacctgagc
tccaagacaggtctgggcatgatgcagaacacaggcctgtgcgttgtagctgacaaactt
aacttcatccgctacctgtcccacttccgctgcgtgcacagaggagcagccttcgccaag
atgaggaccacttcagtccgaaagctgctccccgagtcctggggcttcctgtgtcccgtg
cacactccggatggggagccctgcggactcatgaaccacatgacggccatctgtgagatc
gtggcgccgaccttacccaccacatccctccctgccctgctctgctccctcggtgtgact
ccggtggatgggaccccgggcaaggcatacgcagactgctaccccgtgctgctggatgga
gctgtggtaggctgggtggaggcagagctcgccccggtggtggtggactctctgcgcatg
ttcaaggtgctgaaagagaagaagatccctccctggactgagatcgttctggttcctaaa
acaggaaaggccagcatgtacccgggcgtgttcctcttcaccaccccctgccggatggta
cgacccgtacgcaacttagctctgggcaagcaggagctgatcggcacctttgaacaactt
tacatcaatgtgggcatcatggaggatgagatagagccgggggtgaccacgcaccaggag
ctcttccctcacagcatgctcagcgtggtggccagcttcatcccatactccgaccacaac
cagagccccaggaacatgtaccagtgtcagatgggtaagcagacgatgggtttccccctg
cactccttcctggatcgctccgacaacaagctgtaccggctgcagaccccccagagcccc
atggtgcggccctgcatgtacgaccactacaacctggacaactacccgagcggtaccaac
gccattgtggccgttatctcctacacaggctacgacatggaggacgccatgatcattaac
aagtcgtcctggnagagaggcttcgcccacgggagcatctacaagactgagctggtggac
ctggcagaaaaagtgcggggagaagacagcgtggtgttcggggtcaagcccggagaccct
aaggtcaatgacaaactggacgctgatggactgccattcattggatccactctacaatac
ggagacccgttctacggctacatcaacctgaacaccggccagacctccgtcaacttctac
acagtaggtttcaatggtttgattatttggcaaaagagccaggaggcgtgtgtggtggac
aacataaaggtctgcagcaacgacacgggcacgggccgcctcagcgcatctgcatcaatg
cgggtgccacgaaacccgaccatcggcgacaagttcgccagccgccacggtcagaagggc
atcctgagccgtctgtggcccgccgaggacatgcccttcacggagagcggcatggccccc
gacatcctgttcaacccgcacggcttcccctcccgcatgaccatcgggatgctcatcgag
agcatggcgggcaagtcgggcgccctgcacggcctgagccacgacgccacgcccttcacc
ttctccgaggagagctccgcactggagtacttcggggagatgctccgagcgggcgggtac
aactactacggcaccgagcggctctacagcggtgtgagcgggctggagctggaggcggac
atcttcatcggggtggtctactaccagcggctgcgtcacatggtctcagacaagttccag
gtgaggacgacgggagcgcgagacaaggtgaccaaccagccggtgggggggaggaacatt
cagggaggcatccggttcggggagatggagcgagacgccctgctggcccacggctcgtcc
ttcctgctgcacgaccgcctcttcaactgctccgaccgctcggtggcgcaggtgtgtgtc
gactgcggcagcctgctctcccccctcctagagaaacctcccccctactggtcgtccatg
cgtaaccgcaagactgtctgcaccctgtgcgggaaaagtgactccatcgactcggtgtcg
gttccatacgtcttccgctactttgtcgccgagctagcagcgatgaacatcaaagtcaag
ttggatattaagtga
DBGET
integrated database retrieval system
