Pseudomonas germanica: J0G10_01950
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Entry
J0G10_01950 CDS
T08191
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00250
Alanine, aspartate and glutamate metabolism
pgf00310
Lysine degradation
pgf00350
Tyrosine metabolism
pgf00650
Butanoate metabolism
pgf00760
Nicotinate and nicotinamide metabolism
pgf01100
Metabolic pathways
pgf01120
Microbial metabolism in diverse environments
Module
pgf_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
J0G10_01950 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
J0G10_01950 (gabD)
00310 Lysine degradation
J0G10_01950 (gabD)
00350 Tyrosine metabolism
J0G10_01950 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
J0G10_01950 (gabD)
Enzymes [BR:
pgf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
J0G10_01950 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
J0G10_01950 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
J0G10_01950 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QYY82238
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All DBs
Position
446689..448131
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AA seq
480 aa
AA seq
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MQLKDTLLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWFELMIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPAGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ
LMSECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKVAVAKLKIGNGLEDGTTTGPLIDEKAVAKVQEHIADAVAKGATVLAGGKA
MEGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacaccctgttgttccgccagcaagccttcattgatggcgcttgggtc
gatgcggacaacggtcagacgatcaaggtcaacaacccggccaccggcgaaatcctcggt
accgtgccaaaaatgggcgctgccgaaacccgccgtgccatcgaagccgcagacaaagcg
ctgccggcctggcgtgccctgaccgccaaagagcgtgccggcaagctgcgtcgctggttc
gagctgatgatcgagaaccaggacgacctcgcgcgtctgatgaccctcgagcagggcaag
ccgctggccgaagccaagggcgaaatcgtttacgccgcgtcgttcatcgagtggtttgcc
gaagaagccaagcgcatctacggtgacgtgattccgggccaccagccagacaagcgcctg
atcgtgatcaagcagccaatcggcgtgaccgcggcgattaccccgtggaacttcccggcg
gcgatgatcacccgcaaggccggtccagcactggctgccggttgcaccatggtgctcaag
ccagcttcgcaaactccgttttccgctttcgcgttggccgaactggcccagcgcgcgggc
attcctgcgggcgtgttcagcgtggtctccggcagcgccggcgacatcggcagcgagctg
accagcaacccgatcgtgcgcaaactgtccttcaccggttcgaccgaaatcggtcgtcaa
ctgatgtcggaatgcgccaaggacatcaagaaagtctcgctggaactgggcggcaacgcg
ccgttcatcgtgttcgacgacgcggacctggataaggccgttgaaggcgcgatcatttcc
aaataccgcaacaacggccagacctgcgtctgcgccaaccgtctgtacattcaggattcg
gtctacgacgcattcgccgagaagctgaaagtggctgtggcgaaactgaagatcggcaac
ggtctggaagacggcaccaccactggcccgctgatcgacgaaaaagccgtggcaaaggtg
caagaacacatcgctgacgctgtagccaaaggcgccaccgtgctggctggcggcaaggcg
atggaaggcaacttcttcgagccgaccatcctcaccaacgtgccgaaaaatgccgccgtg
gccaaggaagaaaccttcggtccactggcgccgctgttccgtttcaaagacgaagccgaa
gtgatcgcgatgtccaacgacaccgagttcggcctggcctcctacttctacgctcgcgac
ctcggtcgtgtgttccgtgtcgcggaagcgctggaatacggcatggttggcgtcaacact
gggctgatctccaacgaagtcgcgccatttggtggcatcaaggcctcgggcctgggccgt
gaaggctccaagtacggcatcgaagattacctggaaatcaaatacctctgcctgggcatc
taa
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