Pseudomonas germanica: J0G10_07270
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Entry
J0G10_07270 CDS
T08191
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pgf
Pseudomonas germanica
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgf03009
]
J0G10_07270 (rimO)
Enzymes [BR:
pgf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J0G10_07270 (rimO)
Ribosome biogenesis [BR:
pgf03009
]
Prokaryotic type
ribosomal protein modification factors
J0G10_07270 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QYY83243
LinkDB
All DBs
Position
complement(1650051..1651388)
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AA seq
445 aa
AA seq
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MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGTIRNVHPSVLAVTGPQQYEQVVNAVHEVVP
PRKDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVDGAPANDLDLEIVPDDVK
QDRWDRFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatccaaaggttggctttgtatctctgggttgcccg
aaagcactggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgacgtg
gtgtccacctatcaggacgccgacgttgtagtcgtcaacacctgcggtttcatcgattcg
gccaaggctgagtcgctggaagtgatcggcgaagcgatcaaggaaaacggcaaggtgatc
gtcaccggttgcatgggcgtggaagaaggcaccatccgcaacgtgcacccgagcgtgctg
gccgtgaccggcccgcagcagtacgagcaagtggtcaacgctgtgcacgaagtcgtgccg
ccgcgtaaggatcacaatccgctgatcgacctggtgccgccgcaaggcatcaagctgacc
ccgcgccactacgcgtacctgaagatttccgaaggctgcaaccacagctgctcgttctgc
atcatcccgtcgatgcgcggcaaactggtcagccgtccggtcggtgatgtgctcgacgaa
gctcagcgtctggtcaaatccggcgtcaaagagctgttggtgatttcccaagacaccagc
gcctacggcgttgacgtgaaataccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactctgcgaagcgctgagcaccctcggcgtctgggtgcgtctgcactac
gtttacccgtacccgcacgttgacgagctgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgttgaagtcgatgaaacgc
ccggcgttcgaagacaagaccctggcacgcatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgaccttcatcgtcggcttcccgggcgaaaccgaagaagacttccag
tacctgctgaactggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactcg
ccggtggatggcgctccggccaatgatctggatctggagatcgtaccggacgacgtcaag
caggatcgttgggatcgcttcatggcgcaccagcaggcgatcagctcggcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtgctggtggacgaagtcgacgagcaaggcgcggtt
ggccgctgcttcttcgatgccccggaaatcgatggcaacgtgtttattgataacggcagc
aatttgaagccgggcgataaggtctggtgcaaagtgactgacgctgacgaatacgacctg
tgggctgagcagatctga
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