Photobacterium ganghwense: FH974_23485
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Entry
FH974_23485 CDS
T07175
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00040
Pentose and glucuronate interconversions
pgh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FH974_23485
Enzymes [BR:
pgh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
FH974_23485
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
QSV16190
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Position
2:1627985..1629151
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AA seq
388 aa
AA seq
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MAKGDIISLAFESFIDDDTQVKVTRLTPTDITCHRNYFYQKCFTKDGKKLLFAGDFDGNR
NYYLLDLETQQATQLTEGKGDNTFGGFISDDDQTFFYVKNELNLMKVDLTTLEETIIYTV
DDEWKGYGTWVANSECTKLVGIEILKSCWKPLTDWQKFHDFYHTNPTCRLIKVDIETGEL
EVVHQDDAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHEEGESC
THEFWIPDGSAMAYVSYFKGQTERVIYKANPDTLENEEVMVMPPCSHLMSNFDGSLMVGD
GCDAPVDVADGDSYDIENDPFLYILNTKKKTFAKLAKHNSSWEVLDGDRQITHPHPSFTP
DDNGVLFTSDFEGVPAVYIAEVPEEFKH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtgacatcatttcactggcgttcgaatcattcattgacgacgacactcaa
gtgaaggtaacccgcctgacccctaccgacatcacttgccaccgcaattacttctaccag
aagtgcttcaccaaggacggtaaaaagctcttgtttgccggcgattttgacggcaaccgc
aactactacctgctggacttagagacccaacaagcgactcagctgaccgaagggaaaggc
gacaacacattcggcggctttatttcggatgatgaccaaacgttcttctacgtcaaaaat
gagctgaacctgatgaaggtcgacctgacgacgctggaagaaaccattatttacaccgtg
gatgatgagtggaaaggctacggcacctgggtagctaattcagagtgtactaagctggtc
gggatcgaaatcctgaaaagctgctggaaaccactgaccgattggcagaaatttcacgat
ttctaccacaccaatccaacctgccgtctgatcaaggtcgacattgaaaccggcgagctg
gaggtagtacaccaggatgatgcctggctgggtcaccctatctaccgcccgtttgatgat
tccacagttggtttctgccacgaagggccgcacgatctggtggatgcacggatgtggctg
gtcaacgaagacggcagtaacgtacgcaaaatcaaagagcacgaagagggcgaatcatgc
acgcatgagttctggattccggacggcagcgccatggcctacgtatcttatttcaaaggc
cagaccgaacgtgtgatttacaaggccaacccggatacactggaaaacgaagaagtgatg
gtgatgccaccttgttctcacctgatgagcaactttgacggctcactgatggtcggtgac
ggctgcgatgcgccggttgatgtggccgacggtgacagttacgacatcgaaaatgatccg
ttcctgtacatcctgaacaccaagaaaaagacctttgctaaactggcaaaacataactct
tcttgggaagtactggatggcgaccgtcaaatcacgcatccacacccatcatttaccccg
gatgacaacggcgtactgttcaccagtgattttgaaggtgtcccggcggtgtatattgcc
gaggttcctgaggagtttaaacactaa
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