KEGG   Porphyromonas gingivalis W83: PG_0155
Entry
PG_0155           CDS       T00145                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pgi  Porphyromonas gingivalis W83
Pathway
pgi00740  Riboflavin metabolism
pgi01100  Metabolic pathways
pgi01110  Biosynthesis of secondary metabolites
pgi01240  Biosynthesis of cofactors
pgi02024  Quorum sensing
Module
pgi_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pgi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PG_0155 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PG_0155 (ribD)
Enzymes [BR:pgi01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PG_0155 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PG_0155 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC_N
Other DBs
NCBI-ProteinID: AAQ65395
UniProt: Q7MXL9
LinkDB
Position
complement(177951..178943)
AA seq 330 aa
MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGMPHAEVIAINSV
RDRALLRESTLYVSLEPCSHYGKTPPCAELILREGIPHVVVAMLDPFPSVSGRGIKMLRD
AGVSVQVGLLAEEAEELNRHFLTAQRQHRPYVTLKWAESSDGFIDALRDDASTPPVRLST
PLTTRFVHHRRMIHDAILVGFRTALLDNPSLTVRHWYGRNPLRVVTDRHLALPRHLTLFD
GSVPTLVFTEKEQPSGYPSAVSFVRIDPSRPPVEQMLAELHARGIQSLLVEGGACILRSF
IDSGLYDDVRIEHSTIILNEGVRAPHLPSY
NT seq 993 nt   +upstreamnt  +downstreamnt
atgactcccgatcctctgtatatgcgccgtgccatcgaattagcacagaatgccgaaggg
ttcacctctcccaatccgcttgtcggagcagtccttgtggctcatgggcgtatcatcggt
gagggctaccaccactgtgccggcatgccccatgccgaagtcatcgccataaactctgtg
cgagacagggctttgctcagagaaagtaccctctatgtcagtctggagccttgctctcat
tatggcaaaacgcctccctgtgccgagctgatccttcgggagggcatccctcatgtagtg
gtggccatgctcgatcctttcccatccgtttcaggaagaggcatcaagatgttgcgtgac
gcaggcgtatcggtccaagtgggactacttgcagaggaagccgaggagctgaatcggcat
ttcctcacagcccaacggcaacaccgtccctatgtcacactcaaatgggcagagagtagc
gacggattcattgacgcactgcgcgacgatgcctccacccctcctgtcaggctgagtaca
cctctgaccacacgctttgtgcaccatagacgaatgatacacgatgccatattggtgggg
ttccgtaccgctcttttggacaatccctctctgacggttcggcattggtacggccgaaat
ccgctacgtgtggtcacagatcgccatctggctctcccacgccacctcaccctcttcgat
ggcagtgtgcccacactggtctttaccgaaaaagaacaaccctccggctatccctccgct
gtctctttcgttcggatcgatccctcccgccctcccgtggagcagatgctggccgaactg
cacgctcgcggcatacagtcgctgttagtggagggaggtgcctgtatactccgatctttc
atagacagcggtctgtacgatgatgtacgtatcgaacacagcaccattatcttaaacgag
ggagttcgtgctcctcaccttccctcttactga

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