Pteropus giganteus (Indian flying fox): 120621004
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Entry
120621004 CDS
T07511
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pgig
Pteropus giganteus (Indian flying fox)
Pathway
pgig04721
Synaptic vesicle cycle
pgig04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
120621004 (SLC6A4)
04721 Synaptic vesicle cycle
120621004 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgig02000
]
120621004 (SLC6A4)
Transporters [BR:
pgig02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120621004 (SLC6A4)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
120621004
NCBI-ProteinID:
XP_039742139
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All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLKSQKDLSACKDGDDCQENGILQKGVPTPGDKTESGQISNGYSAVPSPSAGDDTE
HSIPAATTALVAEIHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGVPLFYMELVLGQYHRNGCISIWRKICPLFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSEDNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLAFCIMLIFTVIYFSIWKGIKTSGKVVWVTATFPYIILLVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLGVVVTCFFGSLIT
LTFGGAYVVKLLEEFATGPAVLTVALIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGTSSFICIPTYITYRLVTT
PGTFRERLIKSITPETPTEIPCGDIRLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcctttaaagtcccagaaggacctgtcagcgtgtaaggatggagatgat
tgtcaggagaatggaatactgcagaagggtgtccccacccctggggataaaacggagtct
ggccaaatctccaatgggtactcagcggttccaagccccagtgcaggcgacgacaccgaa
cactccatcccggccgccaccacggccctagtggctgagattcatcagggggaacgggag
acctggggcaagaaggtggatttcctcctgtcggtcattggctacgccgtggacctgggc
aacgtctggcgctttccctacatatgttaccagaatggagggggggcgttccttctcccc
tataccatcatggccatttttggaggggtcccactcttctacatggagcttgtgctgggc
caataccaccgaaacggatgcatttcgatatggaggaaaatctgccctcttttcaaaggg
attggttacgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcacggatcagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctccgaagacaacgtcacctgg
acacttcactccacgtcccctgcggaggaattttacacgcgccatgtcctgcagatccac
cggtctaagggactccaggacctggggggcatcagctggcagcttgccttctgcatcatg
ctgatcttcactgttatttactttagcatctggaaaggcatcaaaacctctggcaaggtg
gtatgggtgacagccaccttcccgtacatcatccttctggtcctgctggtgaggggagct
acactccctggagcctggaggggtgtgctcttctacttgaaacccaactggcagaagctc
ctggagacaggggtgtgggtggatgctgctgctcagatcttcttctctcttggtcctggc
tttggggtcctactggctttcgctagctacaacaaattcaacaacaactgttatcaagac
gccctggtgaccagtgtggtgaactgcatgacgagcttcgtttcaggattcgtcatcttc
acggtgctcgggtacatggctgagatgaggaatgaagatgtgtctgaggtggccaaagat
gcgggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccggcatcc
acgttctttgccatcatcttcttcttgatgttaatcacactgggcttggatagcacgttt
gcaggcttggagggggtgatcacagctgtgttggatgaatttccacacatctggtccaag
cgccgggagtggtttgtgctcggtgtggttgttacctgcttctttgggtccctgatcacc
ctgacttttggaggggcctacgtggtgaagctgctggaggagtttgccacggggcccgcg
gtgctcaccgttgcactgatagaagcagttgctgtgtattggttctatggcatcactcag
ttctgcagtgatgtgaaggaaatgctcggcttcagccctggatggttttggaggatctgc
tgggtagccatcagccctttgtttctcttgttcatcatttgcagttttttgatgagcccg
ccacagctacgacttttccagtataattatcctcactggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataacttaccggctggttaccact
ccagggacatttagggagcgtcttattaaaagtatcactccagaaacaccaacagaaatt
ccctgtggggacatccgcttgaatgccatataa
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