Panacibacter ginsenosidivorans: FRZ67_21770
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Entry
FRZ67_21770 CDS
T06131
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00020
Citrate cycle (TCA cycle)
pgin00785
Lipoic acid metabolism
pgin01100
Metabolic pathways
pgin01110
Biosynthesis of secondary metabolites
pgin01120
Microbial metabolism in diverse environments
pgin01200
Carbon metabolism
pgin01210
2-Oxocarboxylic acid metabolism
Module
pgin_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgin_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FRZ67_21770
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FRZ67_21770
Enzymes [BR:
pgin01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
FRZ67_21770
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
COMM_HN
Motif
Other DBs
NCBI-ProteinID:
QEC69798
UniProt:
A0A5B8VHK3
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All DBs
Position
5143324..5146074
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AA seq
916 aa
AA seq
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MKDFSYITSSHPQFVESLYQDFSKNPESVDPEFRKFFEGFDFAVNNGSKNGNGAATPAAV
STGEAIDWMREIRVYRIILGYRNKGHLIAKTNPIRERKDRGANLDLGFFGFTEADLDKEF
QAGQLIGLGKTKLRNIIDYLQKAYATHVGVEFKYISEQDRVDWLYNEMERKFNDPLPLEK
RKRILEKLNQGVMFEKFLHTKYIGQKRFSLEGGETTIAALDAIINTAADNDVQEVVIGMA
HRGRLNVLANIMGKTYEQIFSEFEGTAKLDQTMGSGDVKYHMGYGSEVTTPGNKTVHLKL
MPNPSHLEAVDPVVVGFSRAKADVMYESEYDKILPILIHGDASIAGQGVVYEILQMSDLK
GYYTGGTIHFVINNQIGFTTDFDDARSSDYCTSLAGAIQAPVLHVNGDDAEAVVKCVEIA
TRYRQQFNADIFVDMVCYRRHGHNEGDDPKFTQPHMYALIEKHQNPRELYTNYLLEKGEA
DAKDLAKEMEKKFWGDLQERLDEVKQNPLPYNYQQPELWWKSLRKATSDDFVKSPTTAIS
NSDFKKIFDALMSWPEDFTPLKKVEKIIQDKVKLFQAENKVDWATGELMAYASILLDGND
VRMSGQDVKRGTFSHRHAVLRDENTDKEYSRLSRLDGAKGKFRIYNSLLSEYGVLGFEYG
YAMANPHALVLWEAQFGDFSNGAQTMIDQFISAGEQKWNRMNGVTMLLPHGYEGQGPEHS
SARMERYLQACAELNMVITNITTAANLFHALRRQVAWPFRKPLINFSPKANLRHPGSYSH
LSEFISGGFKEVIDDENVTDVAQIKKVLFCSGKLYFDLAERKQKDNRNDVAIIRLEQIYP
LPFKQLDDLYKKYNKAVWFWVQEEPLNMGAASFLQMNLKSINYGVISRNPSAATATGYAK
VHKQEQEEIIQTAFSI
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttttcgtatataaccagctcacatccccaattcgttgaaagcttataccag
gattttagtaaaaaccccgaaagtgttgatccggaattccggaaattcttcgaaggtttt
gattttgctgtaaataacggctcaaaaaacggtaatggggctgcgacgcctgcagcagtt
agcactggcgaagcaattgactggatgcgtgaaattcgtgtttatcgtattattcttggt
tacaggaacaaggggcatttaattgctaaaacaaatcctattcgtgaaagaaaagatcga
ggcgctaaccttgatcttggtttttttgggtttacggaagctgatcttgataaagaattc
caggcaggtcaattaattggtcttggcaaaaccaagcttagaaatattattgattattta
caaaaagcttatgcaacacatgttggtgttgaatttaaatatataagtgagcaggacagg
gtagattggttatacaatgaaatggaaagaaaattcaatgaccctttgcctcttgaaaaa
agaaaacgcatactggaaaaattgaaccagggtgtaatgtttgagaaatttttacatacc
aaatatatcggccagaaaagattttcattggaaggaggggagaccaccattgcggcttta
gatgcaatcattaatactgcggcagataatgacgtacaggaagtggtgattggcatggcg
catagaggaagattaaatgtgctcgctaatatcatgggtaaaacctatgaacaaatattc
agtgaatttgaaggtactgctaaacttgaccagacaatgggtagcggcgatgttaaatac
cacatggggtatggaagtgaggttactacacccggtaataaaactgtccacctgaaacta
atgccaaacccttcacatcttgaagcagtggatccggtggtggtaggtttttcaagggca
aaggcagatgtgatgtatgaaagtgaatacgacaaaattcttccaatacttatacatgga
gatgcttcaattgctggtcagggtgtagtatatgaaatattgcaaatgagcgatctgaaa
ggttattataccggaggtactattcattttgtaattaataaccagattggctttactaca
gacttcgacgatgcccggagctctgattactgtacttcgcttgctggtgctattcaagca
cccgtgctacatgtaaatggtgacgatgctgaagcagtagtaaaatgtgttgagatcgca
acgcgttaccgtcagcagttcaatgctgatatttttgtagatatggtttgttatcgtcgt
catggtcataatgaaggtgatgatccaaagtttacacagccgcatatgtacgcattgatt
gagaaacaccaaaacccgcgtgagctatacacaaactaccttttggaaaaaggtgaagct
gatgcaaaagatcttgccaaagaaatggagaagaaattctggggagatctgcaagaacga
ttagatgaagtaaaacagaatccgcttccttataattatcaacaaccggagttgtggtgg
aagagtttgcgcaaagcaacatctgatgattttgtgaagtcaccaacaactgcaatttcc
aattcagatttcaaaaaaatatttgacgccttaatgtcatggcctgaagattttacgcca
cttaaaaaagtggagaaaattattcaggataaggtcaagctttttcaggctgaaaataaa
gttgattgggcaaccggcgaattaatggcttatgcaagtattctgcttgatggcaatgat
gtgcgcatgagcgggcaggatgttaaacgtggtacattctctcatcgtcatgcagtatta
agagatgaaaatactgataaagaatatagccgtttaagcaggcttgatggagcaaaagga
aaattcagaatttataattccttacttagtgagtatggtgtattaggttttgaatatggt
tatgctatggcaaatccacacgctttggttctttgggaagctcagtttggtgattttagt
aacggcgcacaaaccatgattgatcaatttataagtgctggtgagcaaaaatggaatcgt
atgaatggcgttactatgttgctgcctcatggttatgaaggtcagggccctgaacatagc
agcgcaagaatggagcgttacttacaggcttgtgccgaattgaacatggtaattacaaat
attactaccgctgcaaatttattccacgctttgagaagacaggttgcctggccgttcaga
aaaccattgatcaatttttcgccaaaagcaaatcttcgtcacccgggaagttatagtcat
ctctcagagtttataagtggtggttttaaagaagtgatagatgatgaaaatgtaactgat
gttgcacagatcaaaaaagtattgttctgttccggtaaattatatttcgatcttgctgaa
agaaaacaaaaagacaatcgcaatgatgtagcgatcattcgtctcgaacagatataccca
ttgccttttaaacaacttgatgatctttataaaaaatacaataaagccgtttggttttgg
gtacaggaagagcctttgaacatgggcgccgcatcatttttacaaatgaatttaaagagt
atcaattacggcgtaatcagccgtaacccaagcgcggcaacagctacaggctatgctaaa
gttcataaacaggagcaggaagaaattatacaaacagctttcagcatttaa
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