Paraburkholderia ginsengisoli: I6I06_02785
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Entry
I6I06_02785 CDS
T07246
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00300
Lysine biosynthesis
pgis01100
Metabolic pathways
pgis01120
Microbial metabolism in diverse environments
pgis01230
Biosynthesis of amino acids
Module
pgis_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6I06_02785 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgis01002
]
I6I06_02785 (dapE)
Enzymes [BR:
pgis01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
I6I06_02785 (dapE)
Peptidases and inhibitors [BR:
pgis01002
]
Metallo peptidases
Family M20
I6I06_02785 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
LPD30
Motif
Other DBs
NCBI-ProteinID:
QQC64424
UniProt:
A0A7T4N3B0
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All DBs
Position
1:complement(622352..623491)
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AA seq
379 aa
AA seq
DB search
MSGTLALTEQLIARASVTPDDQHCQRLLIERLSALGFEHETIESNGVTNLWAVKRGVDGT
GGKLLAFAGHTDVVPTGPLEQWHSAPFEPTQRDGKLYGRGAADMKASIAGFVVASEEFVA
AHPAHRGSIAFLITSDEEGPATDGTVKVVEALQTRGERMDYCIVGEPTSSAQFGDMVKNG
RRGSMSGKLIVKGVQGHIAYPHLAKNPVHLLAPALAELVAERWDDGNEYFPPTTWQVSNI
HSGTGATNVIPGHADVMFNFRFSTASTVEGLQARVHAILDRHGLEYDLQWNVSGLPFLTP
RGDLSNALAKAIKDETGVTTELSTTGGTSDGRFIARICEQVIEFGPLNASIHKIDEHIEV
AHIEPLKNVYRRVLEQLIA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaccctcgcccttaccgaacaactgatcgcgcgcgcgtccgtgacgcccgac
gaccagcattgccagcgtcttctgatcgagcgtctgtccgcgctcggcttcgagcacgag
acgatcgaatcgaatggcgtgaccaacctgtgggccgtcaaacgcggcgtcgacggcacc
ggcggcaagctgctcgcgttcgcgggccacaccgacgtggtgccgaccggcccgctcgaa
caatggcattcggcgccgttcgagccgacccagcgcgacggcaagctgtacggccggggc
gcggcggacatgaaggcgtcgattgccggcttcgtggtggcaagcgaggaattcgtcgcc
gcgcaccccgcgcatcgcggctcgatcgccttcctgatcacgagcgacgaagaaggcccg
gccaccgacggcaccgtgaaggtggtcgaagcgttgcagacacgcggcgagcgcatggac
tactgcatcgtcggcgaaccgacgtcgagcgcgcaattcggcgacatggtgaagaacggc
cggcgcggttcgatgtcgggcaagctgatcgtcaagggcgtgcaaggccatatcgcgtat
ccgcatctggcgaaaaatccggtgcatctgctcgcgcccgccctggccgagctggtggcc
gaacgctgggacgacggcaacgaatatttcccgcccaccacgtggcaggtgtcgaacatt
cacagcggcaccggcgcgaccaacgtgatccccggccacgcggacgtgatgttcaacttc
cgcttctcgacggcgagcacggtcgaaggtttgcaggcgcgcgtgcatgcgatcctcgac
aggcacggcctcgaatacgatctgcaatggaacgtgagcgggctgccgttcctgacgccg
cgcggcgatctgtcgaacgcgctcgcgaaggcgatcaaggacgaaaccggcgtcacgacc
gaactgtcgaccaccggcggcacgtcggacggccgcttcatcgcgcgcatctgcgagcag
gtgatcgaattcggcccgctgaacgccagcatccacaagatcgacgaacatatcgaagtc
gcacacatcgagccgctgaagaacgtgtatcgccgcgtgctcgaacaactgatcgcctga
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