Paraburkholderia ginsengisoli: I6I06_16655
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Entry
I6I06_16655 CDS
T07246
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00540
Lipopolysaccharide biosynthesis
pgis01100
Metabolic pathways
pgis01250
Biosynthesis of nucleotide sugars
Module
pgis_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
I6I06_16655 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgis01005
]
I6I06_16655 (rfaD)
Enzymes [BR:
pgis01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
I6I06_16655 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pgis01005
]
Core region
I6I06_16655 (rfaD)
BRITE hierarchy
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QQC63894
UniProt:
A0A7T4N2C9
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All DBs
Position
1:3714448..3715440
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AA seq
330 aa
AA seq
DB search
MTLIVTGAAGFIGSNLVKALNERGEQRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVER
FRRGDFGKVRAIFHEGACSDTMETDGRYMMDNNFRYSRDVLDVCLAQNIQFLYASSAATY
GGSSRFVEEREVEQPLNVYGYSKFLFDQVIRRVLPTAKSQIAGFRYFNVYGPRETHKARM
ASVAFHNFNQFRSEGKVKLFGEYNGYAAGEQTRDFVSVEDVVKVNLFFFDNPDKSGIFNL
GSGRAQPFNDIASTVVNTLRALNDEPALSLAEQVQRGLIEYIPFPDALRGKYQCFTQADQ
SKLRAAGYDAPFLSVQEGVDRYVRWLFGQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcatcgtcaccggcgcggccggtttcatcggcagcaatctcgtcaaggcgctc
aacgagcgcggcgaacaacgcatcatcgccgtggacaacctcacgcgcgccgacaagttc
aagaatctggtcgactgcgaaatcgacgactatctggacaagaccgaattcgtcgagcgc
ttcaggcgcggcgacttcggcaaggtgcgtgcgattttccacgaaggcgcctgctcggac
acgatggaaaccgacggccgctacatgatggacaacaacttccgctacagccgcgatgtg
ctcgatgtctgcctcgcgcagaacatccagttcctgtacgcgtcgtcggcggcgacgtat
ggcggctcgagccgtttcgtcgaagagcgcgaagtcgagcagccgctgaacgtgtacggc
tattcgaagttcctgttcgaccaggtgatccgccgcgtgctgcccaccgcgaaaagccag
attgccggcttccgttacttcaacgtgtacgggccgcgcgaaacgcacaaagcgcgtatg
gcgtcggtcgcgtttcacaacttcaaccagttccgctccgaaggcaaggtcaagctgttc
ggcgagtacaacggctacgcggcgggcgagcagacgcgcgacttcgtgtccgtcgaagac
gtcgtgaaggtcaacctgttcttcttcgacaacccggacaagtcgggcatcttcaatctg
ggcagcggccgcgcgcaaccgttcaacgacatcgcgagcacggtggtcaacacgctgcgc
gcgctgaacgacgagccggcgctgtcgctcgcggagcaggtgcagcgcgggctgatcgaa
tacattccgttcccggacgcgctgcgcggcaagtatcaatgcttcacgcaggcggatcag
tcgaagctgcgcgcagcgggctacgacgcgccgttcctgagcgtgcaggagggtgtcgat
cgttacgtacgttggctattcggccaggtgtaa
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