Pseudobacter ginsenosidimutans: FSB84_23705
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Entry
FSB84_23705 CDS
T06126
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pgo
Pseudobacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgo03009
]
FSB84_23705 (rimO)
Enzymes [BR:
pgo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FSB84_23705 (rimO)
Ribosome biogenesis [BR:
pgo03009
]
Prokaryotic type
ribosomal protein modification factors
FSB84_23705 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEC44533
LinkDB
All DBs
Position
complement(6016715..6018025)
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AA seq
436 aa
AA seq
DB search
MKTRTRKQDKVNIITLGCSKNMVDSEVLSGQLLANEIDVVHENQKKDHNIVIVNTCGFID
KAKEESINTILDQVELKRKGKLDKVYVTGCLSERYKNNLETEIPEVDAYFGTMELPLILK
QFEADYKAELIGERLLATPKHYAYLKISEGCNRTCSFCAIPLMRGKHVSRTMEDLVKEAG
KLVSMGVKEVMLIAQELTYYGLDIYKKRSLNDLLHRLADVKGLEWIRLHYAYPSKFPLEI
LDAMRQRDNICNYLDMPLQHASDNMLKAMRRQITKSEMDELIHAIRETVPGIHLRTTLIT
GFPGETRDDVETVKSFLQQHRFDRVGIFTYSHEENTSAYDLEDTIPAEEKEARAQEIMEV
QQEISFEKNQEKIGQTFKTLIDKKESGRYLGRTEFDSVEVDNEVIIQTNKKLTIGEFVNV
KITKAYDYDLEGEIVP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagaacaagaaaacaggacaaggtaaatatcattaccctcggctgcagcaag
aacatggtagacagtgaagtactgagcggacaactactggccaacgagatcgatgtggtg
catgaaaaccagaaaaaagaccacaatatcgtgatcgtgaatacctgtggctttatagac
aaggccaaggaagaatccatcaataccatcctggaccaggttgagctcaaacgtaaagga
aaacttgataaggtttatgtaaccggctgcctgagtgagcgttacaaaaataatctcgag
accgaaattcccgaagtggacgcctatttcggaaccatggagctcccactgatcctgaaa
caattcgaggcagactacaaggccgaactgatcggcgaacgccttctggccactcctaaa
cattacgcttacctcaaaatatccgaaggctgtaaccgcacctgcagtttctgcgccatc
ccgctcatgcgtggcaaacacgtgagccgcaccatggaagacctggtgaaggaagccggg
aaactcgttagcatgggcgtgaaagaggtgatgctgattgcacaggaactcacttattac
ggattggatatttataagaagcgcagcctgaatgatcttctgcatcgcctggccgatgta
aaaggactggaatggatccgcctccattacgcatatccatccaagttccctctcgagatc
ctggatgcaatgcgtcagcgtgataatatctgtaattacctcgacatgcccctgcagcat
gccagcgacaatatgctcaaagccatgcgccgccagatcaccaagtcggaaatggacgag
ctgatacacgcgatccgcgaaaccgttcccggcattcacctgcgcaccactctcatcacc
ggcttccccggcgaaacccgcgatgatgtggaaaccgtgaaatcattcctgcaacaacac
aggttcgacagggtagggatcttcacctattctcatgaagagaatacttccgcctacgat
ctggaagacacgatcccggctgaagaaaaagaagcgcgcgcacaggagatcatggaagtg
cagcaggagatcagcttcgaaaagaaccaggaaaagatcgggcaaaccttcaagaccctc
atcgataaaaaagaatcaggccgctatctgggaaggacagaattcgacagtgtggaagtg
gacaatgaagtgatcatccagacgaataagaaactgacgataggcgagtttgtgaatgtg
aagatcacgaaggcatatgattatgatctggaaggagagattgttccttga
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