Paraburkholderia graminis: CUJ91_11075
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Entry
CUJ91_11075 CDS
T05548
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp00040
Pentose and glucuronate interconversions
pgp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CUJ91_11075
Enzymes [BR:
pgp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
CUJ91_11075
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AXF08404
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Position
PHS1_A:2506697..2507980
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AA seq
427 aa
AA seq
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MTISSRLRRFIPGLALLTFSTIAAAGEQPVPRSWIDPDTGHRVIRLTDEPGSASLYFNIN
AFTPDGKQMVYTTADHGIGVIDLATFASRPLVKGPVGGGPGAVVVGRKTPTVYYFKGSSD
DPRYASLWAADIDTGKQRKIAELPSRAGIFSINADESLGVGSYIVGDGEDFNGRQAGQAT
PANWIAEPLNKEQKMARRLAARLPMIVFTVDLKTGRIKPIFASTDWIDHLQFSPTDPTLL
MYAHQGAWQQVEKLWTIRTDGSGNRHIDPRIMQMEGSGHQWWDNNGNIWYDLHFPENVDA
FVASYNVGNGKRIWYHYDQQQSSIHFTRSADGALFAGDGSTAPGAQWIYLFRPELIKDDH
SLGENLIQPGRLRAERLLNMSRHNYRLEPNVRFTPDGKYLIFRSNMLGPVYVFAVEVARA
VSSSGAE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaccatctcgtcgcgcctacgccgattcattccaggcctcgccctgctcactttctct
acgatcgccgcggcaggcgaacaaccagtgccgcgtagctggattgatcccgataccggc
caccgcgtcattcgactgaccgacgagcccggatcggccagcctctacttcaacatcaac
gcttttacgccggatggcaagcagatggtctataccactgccgatcacggtatcggcgta
atcgacctcgcgaccttcgcgtcccggcccctcgtcaaggggccggtgggcggcggcccc
ggcgcggtggtcgttggacgcaagacacctacggtctattacttcaagggctcgtccgac
gacccccgatatgcgtcgctctgggcggctgatatcgacaccggcaagcagcgcaagatc
gctgagttgccatcccgcgccggcatcttctcgatcaatgccgacgaaagcctgggtgtg
ggcagttacatcgtcggagatggcgaagatttcaatggccgtcaggccggccaggccacg
cctgcgaactggatcgccgagccattgaacaaggagcagaaaatggcccggcgtctggcc
gcacggctgccgatgatcgtgttcaccgttgatctgaaaaccggccgcatcaagcccatc
ttcgcgagcacggactggatcgatcatctgcagttctcgccgaccgatccaacgctgctg
atgtatgcccatcagggtgcatggcaacaggtcgaaaagctgtggacgattcgcaccgat
gggtccggcaaccggcacatcgatccacgcatcatgcagatggagggcagcggccaccag
tggtgggacaacaacgggaacatctggtacgacctgcactttcccgagaacgtggatgcc
ttcgtggccagctacaacgtcgggaacggcaagcggatctggtatcactacgaccagcag
cagtcgtcgatccatttcacccggtctgccgacggcgcactgtttgcgggtgacggcagc
acggcgccgggcgcacaatggatttatctgttccgcccggaactgatcaaggacgaccac
agcctcggggaaaacctgatccagccgggacgtctgagagctgagcggctgctcaacatg
tccaggcataactaccggctggaaccgaacgtgcgcttcacccccgacggcaagtatctg
atcttccgctcgaacatgctcggacccgtctacgtcttcgctgtggaggtcgcccgcgca
gtctcctcgtctggggccgagtaa
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