Paraburkholderia graminis: CUJ91_25830
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Entry
CUJ91_25830 CDS
T05548
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
pgp
Paraburkholderia graminis
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CUJ91_25830 (ltrA)
Enzymes [BR:
pgp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
CUJ91_25830 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
DUF6641
Motif
Other DBs
NCBI-ProteinID:
AXF11293
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All DBs
Position
PHS1_B:complement(1723038..1724408)
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AA seq
456 aa
AA seq
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MSMRQAMRQMPAQAGRVGVTCGEAARRTPTSDEACCPRHESGDTGSALLEAALTGENLKQ
AFKRVRSNKGAAGVDGLDVDQTSRHLVTAWPAIREQLLKGTYRPSPVRRVTIPKPDGGER
ELGIPTVTDRLIQQALLQVLQPVLDPTFSEHSHGFRPGRRAHDAVLAAQSYVQSGRRIVV
DVDLEKFFDRVNHDILIDRLQKRIDDAGVIRLIRAYLSSGIMDGGVVQQRDQGTPQGGPL
SPLLANVLLDEVDKELERRGHCFARYADDANVYVRSRRAGERVMALLRRLYGRLRLKVNE
TKSAVASVFGRKFLGYSLWVAAGGVVKRKVAAKPLLAFKHRIRELTHRSGGRSMKKVVEQ
LRPYVQGWKAYFRLAQTPGVWLALDEWLRHRLRAIHLKHWRRGTTIYRELRALGASAAVA
RQVAANSRCWWRNSDGALKRVLTIAYFDQLGVPRLS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcgacaggcaatgcgtcagatgcccgcgcaagcggggcgggtgggggtcacg
tgcggtgaagctgcacggcgtacaccgactagcgatgaagcctgctgcccgcgacatgaa
tccggggacacagggtcggcgctgctggaagcggcgctgacaggagagaacctgaagcag
gcgttcaaacgggtccggtccaacaagggagccgctggcgtggacggtctggacgttgac
cagacgtcgcgtcatctggtgacggcgtggcccgcgatccgtgaacagttgctcaagggg
acgtaccggcccagcccggtacgtcgggtgacgataccgaagccggatggaggcgagcgc
gagcttggcatcccgacggtaacggaccggttgatccagcaggcgctgctacaggtgcta
cagccggttctggaccctaccttcagcgagcacagccacggcttccggcctggacggcgt
gcgcacgacgcggtgttagccgcgcagtcgtacgtgcagtcgggtcggcgaatcgtggtg
gacgttgatctggagaaattctttgaccgggtcaaccacgacatcctgattgaccgtcta
cagaagcgaatcgatgatgccggcgtaatccggctgatccgggcgtatctgagcagcggc
atcatggatggcggagtggtccagcaacgggatcagggcacgccgcaaggcggaccactg
tccccgttgctggccaacgtgctgctcgacgaagtggataaggaactggagcggcggggt
cattgcttcgcgcgctacgccgacgacgcgaatgtctatgttcgtagccgccgggcgggt
gagcgggtgatggcactgctgcggcgtctgtatgggcgactgcggctgaaggtcaacgag
accaaaagcgcggtggccagtgtgtttggtcgcaagtttctgggctacagcctgtgggtg
gctgcgggtggggtggtcaaacgcaaggtggcggccaaaccgctgctggcgttcaaacac
cgcatccgtgaactgacccatcgctctggcgggcgcagcatgaagaaagtggtggaacag
ttacggccttacgtgcaaggctggaaggcgtacttcaggttggcgcaaacacccggtgtg
tggttggcactggatgagtggctgcgtcaccggttgcgcgcgatccatctcaaacactgg
cgccgtggcaccaccatctaccgggaactgcgtgcgctgggggcatcggccgctgtggcg
cgacaagtggcggcgaacagtcgttgctggtggcgcaatagcgacggtgcgctcaagcgc
gtgctgaccatcgcctacttcgaccaactgggcgtaccccgactctcataa
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