Pyricularia grisea: PgNI_04781
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Entry
PgNI_04781 CDS
T09406
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pgri
Pyricularia grisea
Pathway
pgri03020
RNA polymerase
pgri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PgNI_04781
09124 Replication and repair
03420 Nucleotide excision repair
PgNI_04781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgri03021
]
PgNI_04781
03400 DNA repair and recombination proteins [BR:
pgri03400
]
PgNI_04781
Enzymes [BR:
pgri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PgNI_04781
Transcription machinery [BR:
pgri03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PgNI_04781
DNA repair and recombination proteins [BR:
pgri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PgNI_04781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
FTCD_C
EAD4
Motif
Other DBs
NCBI-GeneID:
41959733
NCBI-ProteinID:
XP_030983927
UniProt:
A0A6P8B9S3
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MANLIFAPSSAPLKTIEEIQFGVLAPEEIKNMSVVHVQYPDTMDETRTKPREGGLNDPLL
GTTDRQYKCKTCNNDMNNCPGHFGHIELAKPVYHPGFINKTKKILEMNNDEQFAQALRLR
DPKARFAMVWKACKGKKVCEIETGGKDEKDSIDTATGIEKVPHGGCGSTHPDIRKKALQL
YAKVEEAREEGMKKEVKDKLITPEQAHHILKHIPEDDLWKMGLNKDYARPEWLIVTVLPV
PPPPVRPSISVDGTSQGMRSEDDLTYKLGDIIRANGNVKQAHAEGAPNHICTEFEELLQY
HVATYMDNDIASIPRSLQKSGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVITGDAN
ISLHEVGVPRSIARTLTYPETVTPHNIDRLHQYVVNGPNEHPGAKYIVRTDGTRIDLRHV
KNRGSTQLEYGQKVERHLLTGDYIIFNRQPSLHKESMMGHQVRVMPYSTFRLNLSVTSPY
NADFDGDEMNLHVPQTEETRAEVKELCMVPLNIVSPQRNSPLMGIVQDTLAGTYKLCRRD
VFLTKEAVMDIMLWVPDWDGIIPQPAILRPRPRWTGKQIISMVIPDFVTTHQGGDWNPLN
DDALLIQSGELMFGLLTKKNVGAASGGIIHICYNEQGPARAMAFLNGCQRVVNYWLLHNG
HSIGIGDTIPDPVTIEKIQAHINEQKAEVAELTDLATTNRLEALPGMNIRETFESKVSKA
LNTAREKAGTTTEKSLKDINNAVTMSRSGSKGSSINISQMTALVGQQIVEGKRIPFGFKY
RTLPHFTKDDFSPEARGFVENSYLRGLTPSEFFFHAMAGREGLIDTAVKTAETGYIQRRL
VKALEDVAAKYDGTVRNSLGDIIQFIYGEDGLDGMAIEKQKMDHLNISNSKFDGMYKLDV
MTETRPRELNALEYGNEIFGDPAVQQLLDEEYDAIKADRQLIREINYKKKDDNDMQLPLN
VARVIENAKKLFKIDDAQRSDLRPQDVIPVVKGFLERMVVVPGDDPISKEANYNSSILFK
AQLRSRLAFKRLAVRERLNRIAFDHVVGEMESRWQRSFVSPGEMVGVLAAQSIGEPATQM
TLNTFHFTGISSKNVTLGVPRLKEILNVSAEIKTPGMVVRLDPKIYPDFKQENAKILRSL
VEHTNLRSVTAMTEIYYDPEIQTTTIEEDADMLEGHYLIPEEHQDEPSNQSRWLLRLTLD
RQKMLDKNLHIEDVAASIKGAYASDLVVVHSDNNADEQVIRMRHVMKGDEEDKDGRNIES
DQILKRLEEHMLDGLTLRGIKGIERAFLNKDTRLVVKSDGSLLNSKDAPECEEWYLDTQG
TSLRQVLCVDGVDSVRTLTNDLYQIVDLLGIEAARTALLGELTQVLAFDGSYVNHRHLAL
LVDVMTYRGSIAAVTRHGINRADTGALMRCSFEETVEILLEAAAIGELDDCRGISENVML
GQLAPMGTGAFEVLLDPKMLETVVSNNARMGLMPGLTVKGSSAEGAATPYDTGSPMGDSG
YNLGMASPTMGNFSPIMSGGSDTPTGFATEYGGSLGSMNPYGSGTSPRPTSPFSTSPTSP
FSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAGDSMGY
SPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQH
ASPTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFSPRSPGRNNRNGGQDSYSPTS
PSHD
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctcatctttgcgccgtcgtcggcgccactcaagacgatcgaggagatccag
ttcggtgttcttgcgcccgaggagatcaagaatatgagtgtggtacacgtacaatacccc
gatactatggacgagacccgaacaaagccacgagaaggtggtctcaacgatcctctgctt
ggtacgacagatcgacagtacaagtgcaagacgtgtaataacgacatgaacaattgtcct
ggtcatttcggtcacatcgaactcgcaaaacccgtttatcatcctggattcatcaacaag
acgaaaaagatcttagaaatgaacaatgacgagcaatttgcacaagcccttcggttacga
gacccaaaagcgcgtttcgccatggtgtggaaagcttgcaagggcaagaaggtctgcgag
atcgagaccggtggtaaagatgaaaaggatagtatcgacaccgcaactggcatagaaaag
gttccccacggtggctgtggaagcacacatcccgacatccggaaaaaggcattgcagctt
tacgcaaaggtcgaggaagcccgcgaggagggaatgaagaaggaggtcaaagacaagctc
atcacgcccgagcaggctcatcatattctcaagcatattccagaagacgacctgtggaag
atgggcttgaacaaggactatgccagacctgaatggctgatcgtcacagttctgccagtg
ccaccacctcctgtcaggcccagtatctcagttgacggtacatcgcagggaatgcgtagc
gaggatgatttgacatacaagcttggtgacattattcgcgcaaacggcaacgtgaagcag
gcccatgctgagggagccccgaatcacatttgcaccgagtttgaggagttgcttcaatat
catgtcgccacatacatggataacgatatcgcatcaattcctcgatcgttgcagaagagc
ggtcgtccgattaaatcaatccgcgctcgtctcaagggtaaagaaggccgtctgcgaggc
aacttgatgggtaagcgtgtggacttctccgcacgtacagtcatcacgggtgacgccaac
atctctctccacgaggtcggtgttcccaggagtatcgctcggactttgacataccctgag
acggtcacaccgcacaacattgatcgtcttcaccagtacgttgtcaacggtccgaatgag
caccctggcgccaagtacattgtcaggaccgacggcacgcggattgatctcaggcacgtc
aagaaccgcggctcaactcagctcgagtatggccagaaagttgagcgtcatcttttgacg
ggagactatatcatcttcaaccgtcagccttcacttcacaaggaatccatgatgggtcat
caagtgagagtaatgccttactcaactttccgcctcaacctttcggtcacgtcgccttac
aacgccgatttcgatggtgacgagatgaatttgcacgtcccacagactgaggagactcgc
gcagaggtcaaggagctgtgcatggtgccactgaacattgtgtcgccccagcgaaacagt
ccccttatgggtatcgtccaagacacattggctggtacgtacaagctatgtcgtcgtgac
gttttcctcacaaaggaagcagtaatggacattatgctctgggttccggattgggatgga
attattcctcagcctgctattctccgccccaggccacgatggaccggcaagcagattatc
agcatggtcattcccgacttcgtgaccactcaccagggtggtgattggaaccccttgaac
gatgatgctctactgattcaatcgggtgagctcatgtttggacttctgaccaagaagaac
gtcggtgctgcttcgggaggtatcatccatatttgctacaacgagcaaggcccggcaaga
gccatggctttcctgaacggttgccaaagggttgtcaactactggctactccacaacggc
cacagtatcggtatcggtgatacgattcctgaccctgtgaccattgagaagattcaagcc
catatcaatgagcagaaggcagaagtcgccgagcttactgaccttgctaccaccaacagg
ctggaagctcttcccggtatgaacatcagagagacgttcgaaagtaaagtctccaaggcg
cttaacacggcccgtgaaaaggctggtaccacgactgagaagagtttgaaggacatcaac
aacgccgttactatgtcgcggtccggatccaagggttcctcaatcaacatttctcaaatg
actgcattggtcggtcaacaaattgtcgaaggcaagcgtattccgttcggcttcaagtat
cggacgctaccacacttcaccaaggacgatttttcacccgaggcccgaggttttgtagag
aattcgtaccttcgtggcctgactccttccgagtttttcttccacgccatggctggtcgt
gagggtcttatcgatacagcagtcaagactgccgagacgggttatattcaacgacgtctt
gtcaaggcgcttgaagatgttgctgctaaatatgatggaactgtccgtaattccctgggt
gacatcatccagtttatctacggagaagatggtctcgatggtatggctatcgagaagcag
aagatggaccacctcaacatttcaaatagcaagttcgatggcatgtacaagctggatgtc
atgaccgagactcgtcctcgtgagctcaatgctctggagtacggaaacgaaatctttggt
gatcctgctgttcagcagctgcttgacgaggaatacgacgccatcaaggcagaccgtcag
ctcatccgcgagatcaactacaagaagaaggatgacaacgatatgcagctgcctctcaac
gtggcgcgtgtcattgagaacgccaagaagcttttcaagattgacgatgctcagcgcagt
gaccttcggccgcaggatgttattcctgttgtcaagggcttcttggagcgcatggtcgtt
gtcccgggagatgacccaatctccaaggaggcaaactacaattcatccatcctcttcaag
gcacagctgcgctctcgccttgccttcaagcgcttggctgttcgcgagcgactgaatcgc
atcgcctttgaccacgtcgttggtgagatggaaagcagatggcaacggtccttcgtcagc
cctggtgagatggttggtgtcttggccgcgcagtccatcggtgagcctgccactcagatg
acgttgaacacattccactttactggtatttcctctaagaacgtcacgctgggtgtgcca
cgtctcaaggaaattctcaacgtttcggccgaaatcaagacgcctggcatggtggtacgt
cttgaccccaagatataccctgatttcaagcaggagaacgccaagatccttcgtagtttg
gtagaacataccaacctccgctccgtgaccgccatgaccgagatttactacgacccagag
atccagaccaccacaatcgaagaagatgccgacatgctcgaaggacactacctcattccc
gaggagcatcaagatgaaccatcgaaccaatctcgctggctcttgcgtctcacgctggat
cgtcaaaagatgcttgacaagaacttacacattgaagatgtagctgccagcatcaagggt
gcgtacgcaagcgacttggttgtcgtgcacagcgacaacaacgccgacgagcaggtcatt
cgtatgcgtcacgtcatgaagggtgatgaagaagacaaggatggaaggaatattgaatcc
gaccagattctcaagcgcctggaggagcatatgcttgacggcctgaccctcagaggtatc
aagggcatcgagcgagccttcttgaacaaagatacgaggctggttgttaagtcggatgga
tctctgcttaacagcaaggacgcgcccgagtgtgaggaatggtacctagacacacaaggc
acatcgctgcgccaggttttgtgcgtcgatggtgttgacagcgtgaggacgcttaccaac
gacctgtaccaaatcgtcgacctactcggtatcgaggcagcccgaactgcgctgcttgga
gagctgacacaggtgcttgctttcgacggttcttatgtcaaccatcgccatcttgcgttg
ttggtcgatgtcatgacgtaccgtggcagcatagcagccgtcacacgtcacggtatcaac
cgtgcagacacgggagcgctgatgcgttgttcgttcgaggagaccgttgagattttgctc
gaggcagctgccatcggtgaacttgatgactgtcgtggtatttcagagaacgttatgctc
ggccagttggcacccatgggcacaggcgcgttcgaggttctactcgaccccaagatgctg
gagacggtcgtatccaacaacgcgcgcatgggtctgatgcctggcctgacagtcaagggt
agctctgccgagggtgccgcaacaccctacgacactggctcacccatgggtgactctggt
tacaacctgggcatggcttctcccaccatgggtaacttctcgcccattatgagcggaggt
tccgatacccccacaggcttcgcaaccgagtatggtggtagcttgggcagcatgaaccct
tacggatctggcaccagccccaggccaaccagccccttcagcacctcgcccacttcacca
ttcagtgctggatacggcagttattcgccaacttcgcctatggctgggtactctcctacc
tctcccatgatggacggcggtcgctacggtgcttcgtctccttcattcagcccgtcatcg
ccctcgttccagccgacttctcccatcatgcgccatggtgcaggcgattccatgggctac
agcccgacctctccgacttatcaacctggctcgccgactggtggcgacaatcactactcc
ccaacctcgcccgcccagtttggcgcctcgcccacctcgcctctgtactcacctgccagc
ccgagcttctctccaggaggtgccacatcccccatgtactatgttggttcgccacagcac
gcgtctcctacctcaccaaatgcacactactctcccacaagtccgtcattccagaggtcg
cccgcacaggcatcgcccacgagcccagggccctactcgccaacgtctccgtcgttctcg
cctagatctcctgggaggaacaaccgcaatggaggccaagactcatactcacctacttct
ccaagccatgactag
DBGET
integrated database retrieval system
