KEGG   Pedobacter ginsengisoli: CPT03_07800
Entry
CPT03_07800       CDS       T05145                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs00740  Riboflavin metabolism
pgs01100  Metabolic pathways
pgs01110  Biosynthesis of secondary metabolites
pgs01240  Biosynthesis of cofactors
pgs02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CPT03_07800 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CPT03_07800 (ribD)
Enzymes [BR:pgs01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CPT03_07800 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CPT03_07800 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam YwqJ-deaminase
Other DBs
NCBI-ProteinID: ATP56381
UniProt: A0A2D1U444
LinkDB
Position
1890471..1891526
AA seq 351 aa
MTNELYMRRCLELAKMGNGQVSPNPLVGCVIVCDDQIIGEGYHKKFGEAHAEVNAINDVF
KNHGDNAPALLANATAYVSLEPCAHFGKTPPCADLLIKHRLKKVVIGNTDPFADVNGKGI
EKLHNAGIKVETGILQNECSYLNRRFFTRIKQQRPFIILKWAETANGYFAPKNTAQQWIS
GPLAKKLVHKWRTEEDAILIGKQTAIADNPQLNTREWPGKNPVRIIIDRNLQLPINSHIY
NNDAKTIIINEIKTEVQNNVHFIQMEDMQYYLPQKIAFQLYLMDIQSVIIEGGANILNQF
IQGNLWDEARVFTSANSWTDGISSPIINGIITEEHYIEKDKLTIYKNNPNK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgactaacgaactatatatgaggcgctgccttgaactggcaaaaatggggaatggacaa
gttagcccaaatccacttgtaggctgcgtaatagtatgcgatgatcagataattggcgaa
ggataccataaaaagtttggtgaagcccatgccgaagtaaatgcaataaacgatgttttt
aaaaaccatggtgataatgcacccgcattacttgcaaatgcaaccgcatatgtaagttta
gaaccttgtgcccactttggaaaaacccctccctgtgcagatttactgattaaacaccga
ttaaaaaaagttgttattggcaatacagacccatttgcagatgtaaacggaaagggaata
gaaaaactacacaatgcaggtattaaagtagaaacaggcatactacaaaacgaatgcagc
taccttaatcgtcgcttttttacccgaataaaacagcaacgcccattcataattcttaaa
tgggcagaaacagcaaatggatacttcgctccaaaaaacaccgcacagcagtggataagc
gggccacttgcaaaaaagctggtgcataaatggcgaacagaggaagacgcaatacttatt
ggaaagcaaacggccattgctgataacccacaactaaacaccagagaatggccgggcaaa
aaccctgtaaggattattatagatcgtaatctgcagcttcccataaatagccacatttat
aataacgatgcaaaaaccatcattattaacgaaatcaaaacagaagtacaaaacaatgtt
catttcatccagatggaagatatgcagtactacttgccccaaaaaatagcttttcaactg
tatcttatggatattcagtctgtcattatcgaaggtggagcaaatatcctaaaccagttt
attcagggtaatttatgggatgaagcaagggttttcacttctgccaattcctggacagac
ggcatttcgtctccaataattaatggaataataacagaagagcattatatagaaaaagac
aaattaactatctataaaaacaacccaaacaaatga

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