Pedobacter ginsengisoli: CPT03_15820
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Entry
CPT03_15820 CDS
T05145
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00020
Citrate cycle (TCA cycle)
pgs00785
Lipoic acid metabolism
pgs01100
Metabolic pathways
pgs01110
Biosynthesis of secondary metabolites
pgs01120
Microbial metabolism in diverse environments
pgs01200
Carbon metabolism
pgs01210
2-Oxocarboxylic acid metabolism
Module
pgs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CPT03_15820
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CPT03_15820
Enzymes [BR:
pgs01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CPT03_15820
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
E1_dh
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ATP57825
UniProt:
A0A2D1U885
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All DBs
Position
complement(3828762..3831557)
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AA seq
931 aa
AA seq
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MDNLSYLNGANAEYIESLYQSYKQDPNSVEFGWQKFFEGFDFGRGSSGTSVSSETPEHFL
KEINVLNLINGYRQRGHLFTQTNPVRERRHHLPTLDMENFGLTKADLDTVFNSGIEIGIG
AAKLSDIIDFLKQTYCRSIGAEYKYVRTPEVLSWIENKMESVRNTPNFSIDEKRRILKKL
NEAVSFENFLGTKFLGQKRFSLEGAEALIPALDSVIEKGAELGIEEFVIGMAHRGRLNVL
ANIMQKTYKDIFAEFEGKGYSAESPFGGDVKYHLGYSTDVTTNNGSSVHLSLCPNPSHLE
TVNGVVEGMTRSKIDFKYGGDNARIAPILIHGDASVAGQGIVYEVIQMAGLDGYKTGGTI
HLIINNQIGFTTNYKDGRTSTYCTDIAKVTLSPVFHVNGDDPEALVYAINLAMEYRQKYR
NDVFIDILCYRRFGHNEADEPKFTQPLLYKSIEKHANPRDIYIQQLIGEGKLEASLAKEM
EKEFRGILQERLNEAKEITSTYHEVKFGGAWSDMRLATPKDFETSPNTSVKKSTLLEVAK
RISTLPSNKKFFKKIEKLFDERSKMANTTHVFDWAMGEQLAYGTLLAEGKRVRLSGQDVE
RGTFSHRHAVITLEDSEEEYIPLANISDQQAPFDIYNSHLSEYGVLGFEYGYAMANPNAL
TIWEAQFGDFFNGAQIVVDQYIASAETKWQRENGLVMLLPHGYEGQGPEHSSARIERFME
LCADYNMQVANCTTPANFFHALRRQFKRDFRKPLVVFTPKSLLRNPQCVSKLTEFTDGKF
QEVINDENVNATDVRRVLFCSGKIYYELLEKQQKDQIKDVAIVRVEQLYPTPLEQMETVY
KKYKNAKEAVWVQEEPENMGAWPYLLRKLRRTIFSDIELISRKESSSTATGFAKQHADQQ
AYILAKAFEAPVTETEKKIAKKSVNKVYNVD
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggataatttatcttatctcaacggcgcaaatgccgaatacatagaatccttataccag
tcttataaacaagatcctaattccgttgaatttggttggcaaaagttttttgaaggcttt
gattttggaagaggatcttcaggaacatctgttagttctgaaaccccggagcatttttta
aaagaaattaatgttcttaatttaattaacgggtatcgccagcgtggtcacctgtttacc
caaactaatccggtaagggaaagacgccatcatttacctactttggatatggaaaacttt
ggattaacaaaggcagaccttgacactgtatttaattctggaattgagattggtattgga
gcggccaaactgagtgatataattgattttttaaagcaaacttattgccgttctattggt
gctgaatataagtatgtacgtactcctgaagttctttcgtggattgaaaataaaatggag
agcgtacgtaatactccaaatttctctattgatgagaaaagaaggatattaaagaaattg
aatgaggcggttagttttgagaatttccttggaactaagtttcttggtcagaagcgtttt
tctcttgaaggtgctgaagctttaatacctgccctggattcggtaattgagaaaggtgca
gaacttggaattgaagagtttgtaattggtatggcacacagagggcgcttaaacgttctt
gccaatatcatgcagaaaacctataaggatatctttgctgaatttgaaggtaaaggttac
agtgctgaatctccttttggaggtgatgtgaaataccaccttggttactcaactgacgta
actacaaataatggtagtagtgtgcatttgagtttatgccctaacccgtctcacctggaa
acagtgaatggcgtggtagaaggtatgaccagatctaaaattgactttaagtacggtggc
gacaatgcgcgcattgcaccgattttaatacatggtgatgcttctgtagcgggacagggt
attgtttatgaagtaattcagatggctggtttggatggttataaaaccggtggtacaatt
cacctgattattaacaaccagattggttttactacaaactataaagatggccgtaccagt
acttattgtactgatattgctaaagtaaccctatcgccggtatttcatgtgaatggtgat
gaccctgaggctttagtatatgccattaatttagcaatggaatatcgtcagaaatataga
aatgatgtattcattgatatattatgttaccgcagatttggccacaatgaggctgatgag
cctaagttcacccaaccacttctatacaaaagtatagagaaacatgctaatccacgtgat
atttatattcagcaattgattggtgagggtaaacttgaagcgagtttggctaaggaaatg
gagaaagagttccgtggtatattgcaggaacgcttaaatgaggctaaagaaataacttct
acatatcatgaggtgaaatttggcggtgcatggtcagacatgcgtttagctacacctaaa
gattttgaaacttcgccaaatacttctgttaaaaaatcaacattgcttgaagttgctaaa
agaataagtacgcttccatcaaataaaaagttcttcaagaaaatagagaaactttttgat
gagcggagtaaaatggccaatactactcatgtattcgattgggcaatgggtgagcaactg
gcttatggtactttgttagctgaaggaaaaagagtgcgtttaagtggtcaggatgttgaa
cgcggaacattctcgcacagacatgcggttattactcttgaagattctgaggaagaatat
atcccattggcaaatatttctgaccagcaagctccttttgatatttacaattcgcattta
tctgagtatggtgtgttgggctttgaatatggttatgcaatggctaatcctaatgcgctt
accatttgggaagcccagtttggtgacttctttaacggggctcagattgttgtagatcag
tatattgcaagtgctgaaactaaatggcaacgcgaaaatggtttggtaatgttattgcct
catggttatgaaggacaagggccggagcactcatctgcaaggattgagcgttttatggag
ctttgtgctgattataatatgcaggtagctaactgtacaactccagctaactttttccac
gcattacgcagacagtttaaacgtgatttcagaaagcctttggtagtgtttacgccaaaa
agtttattgcgtaaccctcagtgtgtttcgaagcttactgagtttaccgatggtaaattc
caggaggttattaacgatgaaaatgttaatgcaactgatgttagaagggtattattctgt
tcgggtaagatctattatgagttgttggaaaaacaacaaaaagatcagatcaaggatgtt
gctattgttcgtgtggagcagctttatccaactccgttggaacaaatggaaaccgtgtat
aagaaatacaaaaatgctaaggaggcagtttgggtacaggaagagcctgagaatatgggc
gcatggccatatttgttacgtaaattaagaagaactatctttagtgatattgaactgatt
tcaagaaaagaaagcagtagtactgccactggatttgcaaaacaacatgcagatcaacag
gcatatattttagcaaaagcttttgaagcacctgttactgaaacagagaaaaagattgct
aaaaaatcagtgaacaaagtttataatgtagattag
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