Polymorphum gilvum: SL003B_3245
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Entry
SL003B_3245 CDS
T01458
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00071
Fatty acid degradation
pgv00280
Valine, leucine and isoleucine degradation
pgv00310
Lysine degradation
pgv00362
Benzoate degradation
pgv00380
Tryptophan metabolism
pgv00410
beta-Alanine metabolism
pgv00640
Propanoate metabolism
pgv00650
Butanoate metabolism
pgv00907
Pinene, camphor and geraniol degradation
pgv00930
Caprolactam degradation
pgv01100
Metabolic pathways
pgv01110
Biosynthesis of secondary metabolites
pgv01120
Microbial metabolism in diverse environments
pgv01200
Carbon metabolism
pgv01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SL003B_3245 (fadB)
00650 Butanoate metabolism
SL003B_3245 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SL003B_3245 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SL003B_3245 (fadB)
00310 Lysine degradation
SL003B_3245 (fadB)
00380 Tryptophan metabolism
SL003B_3245 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SL003B_3245 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SL003B_3245 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SL003B_3245 (fadB)
00930 Caprolactam degradation
SL003B_3245 (fadB)
Enzymes [BR:
pgv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SL003B_3245 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SL003B_3245 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SL003B_3245 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
NAD_binding_2
UDPG_MGDP_dh_N
F420_oxidored
Sacchrp_dh_NADP
ApbA
NAD_Gly3P_dh_N
FAD_binding_3
2-Hacid_dh_C
Pyr_redox_2
NAD_binding_8
DFP
AlaDh_PNT_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ADZ71667
UniProt:
F2IY55
LinkDB
All DBs
Position
3499651..3501867
Genome browser
AA seq
738 aa
AA seq
DB search
MTYKNFTLETDADGIALITWDMPGKSMNVIDMSVMDELDALVDAVVADAAIKGAVITSGK
PAFTGGADLTMLGGLLKGYHKDRTKDPEGAARALLDGSRRLSLIYRKLETCGKPFVAAIN
GTCMGGGTELALACHARVGVEDDSFKMGLPEVKVGLFPGAGGTQRVMRMTDGQAGMQFLL
QGQTLRAAKAKAMKLIDETAPAKKLVDTAKKLIKTGVDPVKPWDKKGFKLPNGPIYSPAG
FQFWPAANAIYRRETCDNYPGARYLLQSVYEGLQLPMDLALQVESRYFAHVLQTPEAAAM
IRSLFVSMQELNKLARRPADQRPNKIRKIGILGAGFMGAGIAYVTAQAGINVVLIDRDQE
AADKGKAHSDQLMAKAIQRGRATEAEKEKLLARIDATADYDRLADCDLVIEAVFEDREVK
RVVTEKAEAVMKPRAIYASNTSTLPITSLAEASKRPKNFIGIHFFSPVDKMMLVEVIVGR
KTSDRALAMALDYIKAIRKTPIVVNDSRGFYTSRVVMTYIREGLMMLADGVPAAMIENAG
KMAGMPVGPLSLGDEVALDLAWKIVSATRKDLGVAYVEGPLDNILEEMVVKRERFGRKNG
KGFYDYAGRDKALWPGIVEVVGKPKPADAFNVEEIKQRLLVMQALETARIFEENCLTDVR
EADVGSILGFGFAPYTGGTLSYIDRMGTAAFVDLCRKFTRKWGPRFKPNRLLREMAKANE
SFYGRFPPAGEVKARDAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacctacaagaatttcaccctggaaaccgatgccgacggcatcgccctgatcacctgg
gacatgccgggcaagtcgatgaacgtcatcgacatgagcgtcatggacgagctcgacgcg
ctggtcgacgccgtcgtcgccgatgcggcgatcaagggcgccgtgatcacctccggcaag
ccggccttcaccggcggcgccgacctgaccatgctggggggcctgctcaagggctaccac
aaggacaggacgaaggatccggagggcgcggcgcgggccctgctcgacggctcgcgccgg
ctgtcgctgatctaccgcaagcttgagacctgcggaaagccgttcgtcgccgcgatcaac
ggcacctgtatgggcggcggcaccgagttggcgctggcctgccacgcgcgcgtcggcgtc
gaggacgacagcttcaagatgggcctgccggaagtgaaggtcggcctgttcccgggtgcc
ggcggcacacagcgcgtcatgcgcatgaccgacggccaggccggcatgcagttcctgctg
cagggccagaccctgcgcgctgccaaggccaaggcgatgaagctcatcgacgagaccgcg
ccggcgaagaagctggtcgacacggccaagaagctcatcaagaccggcgtcgatccggtc
aagccttgggacaagaagggcttcaagctgccgaacgggccgatctattcacccgccggc
ttccaattctggccggcggccaacgccatctaccggcgcgagacctgtgacaactatccg
ggcgcgcgctacctgctgcagtcggtctacgaggggctgcagctgccgatggacctggcg
ctgcaggtcgagagccgctacttcgcccacgtgctgcagacgccggaagcggccgcgatg
atccgctctctgttcgtctccatgcaggagttgaacaagctcgcgcgccggccggcggac
cagcggcccaacaagatccggaagatcggcatcctcggtgccggcttcatgggtgccggc
atcgcctatgtcaccgcccaggccggcatcaacgtggtgctgatcgaccgcgaccaggag
gctgccgacaagggcaaggcccattccgaccagttgatggccaaggcaatccagcgcggc
cgggcgaccgaggccgagaaggagaagctgctggccaggatcgacgccaccgccgactac
gaccggctcgccgactgcgacctggtcatcgaggcggtgttcgaggaccgcgaggtcaag
cgcgtggtcaccgaaaaggccgaggcggtcatgaagccgcgcgccatctacgcgtccaac
acctcgacgctgccgatcacctcgctggcggaagcctcgaagcggccgaagaacttcatc
ggcatccatttcttctcgccggtcgacaagatgatgctggtcgaggtgatcgtgggcagg
aagacctccgaccgcgcgctggccatggcgctcgactatatcaaggcgatccgcaagacg
ccgatcgtcgtcaacgacagccggggcttctacacctcgcgcgtggtcatgacctacatc
cgcgaggggctgatgatgctcgccgacggcgtgccggcggcgatgatcgagaacgccggc
aagatggccggcatgccggtcggcccgctgtcgctcggcgacgaggtggcgttggacctt
gcctggaagatcgtctcggcaacccgcaaggatctcggcgttgcctacgtcgaaggcccg
ctcgacaacatcctggaagagatggtggtcaagcgcgagcgcttcggccgcaagaacggc
aaaggcttctacgactacgccgggcgcgacaaggcgctctggccgggcatcgtcgaggtg
gtcggcaaacccaagccggcggatgccttcaacgtcgaggagatcaagcagcgactgctc
gtgatgcaggcgctggaaaccgcccgcatcttcgaggagaactgcctgaccgacgtgcgc
gaggcggatgtcggctcgatcctcggcttcggcttcgccccctacaccggcggcacgctc
agctacatcgatcgcatgggcaccgccgctttcgtcgacctgtgccggaaattcaccagg
aaatggggaccgcgcttcaagccgaaccgactgctgcgcgagatggccaaggcgaacgaa
agcttctacggccgcttcccgccggccggagaggtcaaggcgcgcgacgcggcctga
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