Pectinophora gossypiella (pink bollworm): 126371689
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Entry
126371689 CDS
T09293
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126371689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126371689
Enzymes [BR:
pgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126371689
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
126371689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
HMG_box
Motif
Other DBs
NCBI-GeneID:
126371689
NCBI-ProteinID:
XP_049872941
EnsemblRapid:
LOC126371689
LinkDB
All DBs
Position
13:3334958..3340544
Genome browser
AA seq
1654 aa
AA seq
DB search
MASKSAFASAPGGLTSVDPDSVQFLMFSDEDIKKLSVAKITNTLSFDAMGNPNKGGLYDS
ALGPARDRYEACGTCHNTMLHCPGHFGHIELPLVVVNPLFMKTIYTLFRICCLKCFKIQM
DDKLKFILKLQLQLLDAGHVTAALDLDNFIGDVKEYRTDSSPEKPNKTIRKYQKLLKKSD
PVTETFQSKNTDKLRTRIMNNYFRAINTAKNCMYCRNKLIKVTTSDNKIMYNISSEVGKG
VKILMPDEIQKYCSAIAENDEDILAYCIPVLKHTNVKPATNLFFMELIPVLPPCVRPCNF
LQGELIEHPQTNVYKSILQSAYCARAVLQVLSAADQQKAIDSLDQQPRQAYESVMGKTPA
EKLHSAWQELQKHVNQLLSCEGQGLSSQGLKQIIEKKTGVIRMHMMGKRVNFAARSVITP
DPNVDIDEIGIPDAFALKLTYPVPVTEWNVDELRKMVINGPNKHPGAEKLEIENGRVIRI
PPDSIQKRKSLAKRLLTPEEFKTSGLKIVHRHLVNGDVLILNRQPSLHKPSMMAHRARIL
KGEKTLRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVRKQYLVPKDGTPLSG
LIQDHVISGVKMSLRGAFFNKSDYQQLVFQALSNHKGEIKLLPPTILKPVMLWSGKQILS
TIIINSIPKGKPCLSLSGKAKISSKAWQKEPARPWKAGGTPFTDLNTMTEAEVVIRKGEL
LCGVLDKTHYGATPYGLVHCMYELYGGDSSSAVLSAFSKVFTFYLQWIGFTLGVKDILVV
DEADKNRDDFICLVRQAGKLAAAKATELPVDVDESTVKNTIGEMLIKDPKFRANLDRQYK
TMLDGHTNNINKACLGEGLLEKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRP
PLMISGRSLPSFPPYDISPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGLTVAYDHTVRDADGSVIQFAYGEDGLDVLKCQFFKKGQFEFLDVNSNA
VVTKSVLKKLKEDVDSKTISKSIKSLKKWKKKNGDPFAKVRTSPFAQFSILARKEIELDD
MPTDQTRDPFYWELEKKWRSLSDEEKQEYKRKSCPDPLPSKMSPEYKFGVINEQLDGIIQ
SYLKNRQETLYSEYTEKDKFVEVMNAKYLASMAAPGEPVGLLAAQSIGEPSTQMTLNTFH
FAGRGDMNVTLGIPRLREILMTASAKLKTPNMDIPFRDDISDSTKKVENLRRKLNRVTVN
DVLEKIDVQCEIVTNPDRKLQTTMRFQFLPHSQYKTQYAVKPQQIIKHMQNNFFDEMFIM
IRKQAKATCGVLWSEEKEKKRRVVNDDEDEGDESPADSKPTATADSDSSDDEGPNEDDDN
TDVRIRKKRAEEQEYEDPESEEEEKSDDEVDLVDEPRQSDDIVEVNKDEITAADSRAMSN
VVENIKSATNYTFDTKRHQWCELTVMLPIAFLKVDLSQALRDAAMKSVIHEVKNIKRAIT
NKEKNVLYLKTEGINIVQMSKYNHLLDLNKLYSNDIHAIANTYGIEAANKVIIKEIQNVF
NVYGIAVDPRHLTLVADYMTYNGIFEPMSRKGMESSTSPLQQMSFESSLIFLKEAVLNAK
KDNIRSASSCLMLGQPCRSGTGAFSLQHYSKVIG
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaagtctgcgttcgcgtcggccccgggcgggctgacgtcagtcgacccggac
tcagtgcagtttctgatgttcagcgatgaagatatcaaaaaactcagtgtggctaaaata
accaatacgctatctttcgacgccatggggaaccctaataaaggtggtttgtatgattct
gcgctaggtcccgctcgcgacagatacgaagcctgtgggacatgtcacaataccatgctc
cattgtccgggacacttcggacatatagaactgccgctggttgtcgtcaaccctctgttc
atgaagacaatatacacacttttccgaatatgttgtttaaagtgcttcaaaatccagatg
gatgacaaactgaagttcattttgaaacttcaattgcaacttcttgatgctggtcatgtg
acagctgctttagacctggacaattttattggagatgtcaaagaatatagaactgacagt
tcaccagaaaaaccaaataaaactataagaaaataccagaaactattgaagaagtcagat
cctgttactgaaacatttcaaagtaagaatacagataagttacgaactagaataatgaac
aattactttagagccatcaacactgctaaaaactgcatgtattgcagaaacaaacttatc
aaagttactacatctgataataaaatcatgtataacatcagtagtgaagtaggcaaagga
gtcaagattttaatgccagatgaaatacaaaagtattgctcagctatagctgaaaatgat
gaagatattcttgcatactgcataccagttctgaaacataccaatgtcaaacctgctaca
aatttgtttttcatggaactgatccctgtcttgcctccctgtgtcaggccatgtaacttt
ttgcaaggagaattgattgaacatccacagacaaatgtgtacaagagtatcttacaatct
gcttattgtgcccgagcagtattacaagttctgtctgctgcagatcagcaaaaagcaata
gatagtcttgatcaacaaccaagacaggcttatgaaagtgttatggggaagacacctgca
gaaaagctgcattcggcttggcaagagttgcagaaacatgtaaaccagttgctcagctgt
gaaggtcaaggtctctccagtcaaggtctcaagcaaatcatagagaagaagacaggagta
atcagaatgcatatgatgggtaaaagagtgaactttgctgctcgatctgttatcacccca
gacccaaatgtggatatagatgaaataggtattcctgatgcttttgctttgaaactgaca
tacccagtaccagtaacagaatggaatgtagatgagttgaggaaaatggtgattaatggt
cctaataaacatcctggtgcggaaaaactagagatagaaaatggaagagttattaggatt
ccacctgactcaattcagaaaaggaaaagtcttgctaagagattattaactccagaagaa
tttaaaacttcaggattgaagatagtccatagacatttagtgaatggcgatgttctaata
ttaaaccgtcagccatctctccacaaacccagtatgatggcgcacagagcgcgtattctt
aaaggcgagaaaactctgagattgcattatgccaactgtaagtcctataacgccgatttt
gatggtgacgaaatgaacgcgcattttccgcaaaatgaaatagcaagaagtgaagcttac
aacatcatgtcagtacgaaaacaatatcttgtaccgaaagacggcacgcctttgagtggg
ctaattcaagatcacgttatttctggtgtaaagatgtcccttcgaggcgcttttttcaat
aaatccgactatcaacaacttgttttccaagctctgtcaaatcacaagggagagatcaaa
cttctgcccccaacaatattaaaacctgtaatgttgtggtctggaaaacaaatcctttca
accattatcatcaatagcatacctaaaggtaagccatgcctctcattgtcaggaaaggct
aagatcagtagtaaagcatggcaaaaagaaccagcaagaccatggaaggctggtggaact
cctttcactgatcttaacactatgactgaagctgaagttgtaatcagaaagggagaactt
ttatgtggtgtcctggataagactcattatggtgctacgccgtatggcttggtacactgc
atgtacgaattatacggaggagatagttcaagtgccgtattgagtgccttctcaaaagtg
ttcaccttctatctgcaatggattggatttacacttggtgtcaaagatattttagttgtt
gacgaggcagataagaatcgagatgacttcatctgtttagtgcgtcaagcggggaaactt
gctgctgcgaaagcgaccgaactgccagtggatgtagatgagagcactgtgaaaaatact
atcggagaaatgctcatcaaagacccgaaatttagagctaacttggatagacagtataag
actatgcttgatggacacacaaacaacataaataaagcgtgtctaggcgaaggcttgttg
gagaagttcccctataataatctccagctgatggttcaatctggtgccaaaggttccact
gtgaatacaatgcagatttcatgtttgttaggacagattgagttggaaggcaaaagacca
cccctgatgatatctggacgatctctcccgagttttccaccttatgacatttcaccgaga
gctggaggatttattgatggacgctttatgacgggaattcaaccacaagagttcttcttc
cattgcatggctggtcgtgaaggccttattgatactgctgtgaaaaccagtcgatcgggt
tatttacaaagatgtttgataaaacatttggaaggtttaacagtggcttacgatcataca
gtaagagacgccgatggcagtgtcatccaattcgcgtatggcgaagacgggctcgacgta
ttaaaatgtcaattctttaaaaaaggacaatttgaattccttgatgttaattccaatgca
gtcgttacgaaatcagttttgaagaagcttaaagaagacgtagattccaagacaatatca
aaatcgattaaatcattaaagaaatggaaaaagaaaaatggagatccctttgcgaaagtc
aggacaagtccttttgcgcaattttctattttggctaggaaggagattgagcttgatgat
atgcccactgatcaaacgagagatccgttttactgggaattagagaaaaaatggcgaagt
ttaagtgatgaagaaaaacaagagtataaaaggaaatcatgtcccgatccacttccaagc
aagatgtctccagagtacaagtttggtgtaataaacgagcaactagatggaataattcag
agttatttgaaaaaccgacaagaaaccctttattcagagtatacagagaaagataagttt
gtcgaagtgatgaacgctaaatacttggcgtctatggcagctccaggtgaacctgtaggg
ttgctagctgcccaatccattggagagccttctactcagatgacactgaacacttttcac
tttgctggtcgtggtgacatgaacgtaacactgggtatcccacgtttaagagaaattctt
atgactgcgtccgccaaactcaagactccaaatatggacattccgttcagggatgacatt
tctgattcaaccaagaaagttgagaatcttcgtcggaaacttaatagagtaaccgtgaac
gatgtcttagaaaagattgacgttcagtgtgaaattgttacgaatccggatagaaagttg
cagaccacgatgagattccaattcttgcctcactcgcaatataaaactcagtacgccgta
aaaccacagcagataatcaaacatatgcaaaacaacttctttgacgaaatgtttattatg
atacggaagcaggcaaaagctacttgtggagtgctatggtctgaagagaaggaaaagaag
cgaagggttgtaaatgacgacgaagatgaaggcgacgagagtccagctgatagtaaaccg
acagccactgcagactccgatagctctgatgacgagggacctaacgaagatgatgacaat
actgacgtgagaataagaaagaagcgagcagaagaacaagagtacgaggaccctgaatcg
gaagaagaagagaaatctgacgacgaagtcgacttagtagatgagcccagacaatctgac
gacatcgtcgaagtaaataaagacgaaattacagcagcagacagtagagctatgtctaat
gtcgtggagaatattaagagtgcgacaaactacactttcgataccaaacgtcatcagtgg
tgtgagctgactgtcatgctcccaatcgcctttttaaaagtcgatctgtctcaagctctt
agagacgccgctatgaagtctgttatccatgaagtgaagaacataaaacgcgccatcact
aataaagagaaaaatgtgctctacctcaaaactgaaggaataaatatcgttcagatgtcc
aagtataaccatctgttggatttgaacaagttgtatagcaatgacatacacgccattgct
aacacttatggcattgaagcagctaacaaagtgattataaaagaaattcagaatgtcttc
aatgtatatggcatcgctgtggatccgaggcacttgacattagtagcagattatatgact
tataatggaatatttgagccaatgagcaggaagggaatggaatcgtcaacttcgccgctt
cagcagatgtcattcgaatcgtcattgatatttttgaaagaagctgttttgaatgcaaag
aaggacaatattcgatccgcttctagctgccttatgctcggtcagccgtgccgtagtggt
accggagcgtttagtttacaacactacagtaaagtaatcggataa
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integrated database retrieval system
