Pseudomonas glycinae: AWU82_21550
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Entry
AWU82_21550 CDS
T06994
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pgy
Pseudomonas glycinae
Pathway
pgy00730
Thiamine metabolism
pgy01100
Metabolic pathways
pgy01240
Biosynthesis of cofactors
pgy04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AWU82_21550
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AWU82_21550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgy03016
]
AWU82_21550
Enzymes [BR:
pgy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AWU82_21550
Transfer RNA biogenesis [BR:
pgy03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AWU82_21550
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AMQ85791
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Position
5493450..5494904
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AA seq
484 aa
AA seq
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MKLIVKVFPEITIKSRPVRTKFIRQLAKNIRTVLRDLDPAVVVNGVWDNLELETRVTDPK
ALKEMGERLTCMPGIAHFLQIDEYPLGDFDDITEKCKQHYGDALAGKIFSVRCKRAGKHA
FSSMDVEKYVGSKLRRECGAAGIDLKQPEIEVRIEVRDKRLFVIHSQHNGIGGYPLGALE
QTLVLMSGGFDSTVAAYQILRRGLMTHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDDSHMGVVLKRMMLRVASSIAERLHIDALVTGEAISQVSSQTL
PNLSVIDCVTDKLVLRPLIVAHKQDIIDTADQIGTGDFARHMPEYCGVISVNPKTAAKRG
RVEHEEQEFDMAVLERALANARLVPIDRVIDELGQDLQIEEVSEALAGQIVIDIRHPDAA
EDDPLELAGIEVQTMPFYAVNARFKELDPTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgtaaaagtcttccccgagatcaccatcaaaagccgacctgtccggacg
aaattcatccgccagctggccaagaacatccgcaccgtgctccgcgacctggacccggcc
gtggtggtgaacggtgtgtgggacaacctcgagctggaaacccgcgtcaccgaccccaag
gccctgaaagagatgggcgaacgcctgacctgcatgccgggcatcgcgcactttctgcag
atcgacgagtacccgctgggcgacttcgacgacatcaccgagaagtgcaagcagcactat
ggcgatgcgctggccgggaagatcttctcggtgcgctgcaagcgtgcgggcaagcatgcg
ttcagctcgatggacgtcgaaaaatacgtcggcagcaagctgcgccgtgagtgcggtgcc
gccggaatcgacctgaaacagccggaaatcgaagtccgtatcgaagttcgcgacaaacgg
ttgtttgtgatccacagccagcacaatggcatcggcggttacccgctcggtgcgctggaa
cagacgctggtattgatgtccggcggctttgactcgacggtggccgcgtaccagatcctg
cgtcgcggcctgatgacgcacttctgcttcttcaatctgggcggtcgtgcccacgaattg
ggcgtgatggaagtcgcgcatttcatctggaagaagtacggcagctcgcaacgcgtgcta
tttgtcagtgttccgttcgaagaagtcttgggcgaaattctcggcaaggtcgacgacagt
catatgggcgtcgtgttgaagcgtatgatgttgcgcgtagcgtcgagcattgccgaacgc
ctgcacatcgatgcgctggtcaccggtgaagcgatttctcaggtgtcgagccagacgttg
cctaacctgtcggtcatcgattgcgtcaccgacaagctggtgctgcggccgctgatcgtc
gcccacaagcaggacatcatcgacacggccgaccagatcggtaccggtgatttcgcccgg
cacatgccggaatactgcggcgtcatctcggtcaacccgaagaccgccgccaagcgtggc
cgggtcgagcacgaagagcaggaattcgacatggcggtgctcgagcgtgcgctcgcaaac
gccagactggtgccgatcgatcgggtgatcgacgaattgggccaggatttgcagatcgaa
gaagtcagcgaagcgctggccggtcagatcgtcatcgacatccgtcacccggatgccgcc
gaggatgacccgctggaactcgccggcatagaggtacagacgatgccgttctacgcagtg
aacgctcgtttcaaggaactggaccctactcgccagtacctgctgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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