Panicum hallii (Hall's panicgrass): 112874824
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Entry
112874824 CDS
T07366
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00040
Pentose and glucuronate interconversions
phai01100
Metabolic pathways
Module
phai_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112874824
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112874824
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
112874824
NCBI-ProteinID:
XP_025794164
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Position
1:5046070..5047620
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AA seq
415 aa
AA seq
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MAPSNVAMTVVAAAVALLLLAPARATKAPETADTLPAGGPPSVPAGPLDIVQLGAKGDGK
TDSTQAILKAWKNACDATGTQKIVIPPGNYLTGAMELKGPCKSSIIIRLDGNLLGTGDLS
AYKKNWIEVQNVENFAINGHGTLDGQGPLVWKQNECQKSYNCKILPNSLVLDFVKNAQIR
GITLLNSKFFHMNIFASENVLVDKVTITAPGNSPNTDGIHVGDSTNVTISGATIGTGDDC
VSIGPGSKTIRIHGVRCGPGHGISVGSLGRYKDEKDVEDVKVTDCTLVGTSNGLRIKSYE
DSKSSPKATKFLYEGVTMDNVSFPIIIDQKYCPNNICVRSGASKVAVSDVIFRNIHGTSN
TPEAITLNCANNLPCQGVQLVNVDIKYNKSNNKTMAVCKNAAGKSIGLAKELACL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcccccagcaatgtcgcgatgacggtggtggccgcggcggtggcgctgctgctgctg
gcgccggcgcgcgcgacgaaggcgcccgagacggcggacacactgcctgctggagggccg
ccgtcggtgcccgcgggcccgctggacatcgtgcagctgggcgccaagggcgacggcaag
acggacagcacgcaggcgatcctcaaggcgtggaagaacgcgtgcgacgcgacggggacg
cagaagatcgtgatcccgccgggcaactacctgaccggcgccatggagctcaagggcccc
tgcaagtcctccatcatcatccgcctcgacggcaacctgctcggcaccggcgacctcagc
gcgtacaagaagaactggatcgaggtccagaacgtcgagaacttcgccatcaatggccac
ggcaccctggacgggcagggccccctcgtgtggaagcagaacgagtgccagaaatcctat
aactgcaagatcctccccaacagcctggtgctagacttcgtgaagaacgcgcagatccgc
ggcatcacgctgctcaacagcaagttcttccacatgaacatcttcgcgagcgagaacgtg
ctggtggacaaggtgacgatcacggcgcccggcaacagccccaacacggacggcatccac
gtcggcgactccaccaacgtgaccatcagcggcgccaccatcggcaccggcgacgactgc
gtctccatcgggcccggcagcaagaccatccgcatccacggcgtgcggtgcgggcccggc
catggcatcagcgtcggcagcctgggccggtacaaggacgagaaggacgtggaggacgtg
aaggtcaccgactgcacgctcgtcggcaccagcaacggcctgcgcatcaagtcctacgag
gactccaagtcgtcgcccaaggccaccaagttcctctacgagggcgtcaccatggacaac
gtctccttccccatcatcatcgaccagaagtactgccccaacaacatctgcgtcaggtcc
ggcgcctccaaggtggccgtctccgacgtcatcttcaggaacatccacggcacctccaac
acgccggaggccatcacgctcaactgcgccaacaacctgccgtgccagggcgtgcagctc
gtcaacgtcgacatcaagtacaacaagtccaacaacaagaccatggccgtctgcaagaac
gccgccggcaagtccatcggcctcgccaaggagctcgcctgcctctga
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