KEGG   Panicum hallii (Hall's panicgrass): 112874901
Entry
112874901         CDS       T07366                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03020  RNA polymerase
phai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112874901
  09124 Replication and repair
   03420 Nucleotide excision repair
    112874901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phai03021]
    112874901
   03400 DNA repair and recombination proteins [BR:phai03400]
    112874901
Transcription machinery [BR:phai03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112874901
  RNA polymerase III system
   RNA polymerase III
     112874901
  RNA polymerase I system
   RNA polymerase I
     112874901
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112874901
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF6179 Imm6
Other DBs
NCBI-GeneID: 112874901
NCBI-ProteinID: XP_025794262
LinkDB
Position
9:complement(58829594..58832105)
AA seq 207 aa
MASSEGETNRLWRIRRTLMQMLRDRGYMIHETEDIGLKRAAFVDRYGDPVRRDDLVINRY
KKDNPADQIYVFFPNEAKPGVKTIRNYVEKMKQENVFAGILVVQQALSAFARSAVQEVSQ
KYHLEVFQEAELLVNIKEHVLVPEHELLTPDQKKTLLERYTVKETQLPRIQITDPIARYY
GMKRGQVVKIIRASETAGRYVTYRYVV
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcgtcgtcggagggggagacgaaccgcctgtggcgcatccggcgcacgctgatgcag
atgctgcgcgaccgcgggtacatgatccatgaaaccgaggacatcggcctcaaaagggcg
gctttcgtggatcgctacggcgaccccgtccgccgcgacgacctcgtcatcaaccgctac
aagaaggacaaccccgccgaccagatctacgtgttcttcccgaatgaggccaagcccggc
gtgaagacgatcaggaactacgtcgagaagatgaagcaggagaacgtcttcgccggcata
ctcgttgtgcagcaggcgctcagtgcgttcgcacgcagcgccgtgcaggaggtctcccag
aagtaccatctggaggtcttccaggaagctgagcttcttgtgaacattaaggagcatgtc
ctagtgccggagcacgagctcctgacaccggatcagaagaagacactgctagagcgatac
accgtgaaggaaacccagctcccccggattcagattacagacccaatagcaagatactac
ggcatgaagcgtgggcaggttgtgaagatcatccgagccagtgaaactgctggaagatac
gtcacctaccgctacgttgtctga

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