Panicum hallii (Hall's panicgrass): 112881386
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Entry
112881386 CDS
T07366
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112881386
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112881386
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112881386
03036 Chromosome and associated proteins [BR:
phai03036
]
112881386
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112881386
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112881386
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112881386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Htt_N-HEAT_1
PDS5
Vac14_Fab1_bd
SCD
TAF6_C
Adaptin_N
CLASP_N
Cnd1
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
112881386
NCBI-ProteinID:
XP_025801828
LinkDB
All DBs
Position
2:complement(26630786..26636038)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKEN
DIVDWFIPVVKRLAAGEWFTARVSSCGLFHIAYPSAPDQLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCAA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILEAISLLAPVMGAEITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LIPILDQSVVEKTVRPCLVELSEDPDVDVRYYANQALQVCDQMMVSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgattgatgagcctctgtatccaattgctgtactgattgacgagcttaagaat
gaggatatccaattgcgtctaaactcaatcagaagactttccacaattgctcgggcgctt
ggggaagaaagaaccagaaaggaactgattccatttcttagtgaaaacaatgatgatgaa
gatgaggtgcttcttgcaatggccgaggaattgggtgtgttcattccttatgttgggggt
gtagaacatgctcatgttttgcttccaccattggagacattgtgtacggtggaggaaact
tgtgtccgcgataaggcagttgaatctctgtgccgtattggtgcacagatgaaggaaaat
gacattgtcgactggttcattccagtagtaaagaggctagcagcaggtgagtggtttaca
gctcgggtatcgtcctgtggtctcttccacatagcctatccaagtgcaccggaccaactg
aaaacagaattgaggactatctatggtcagctatgtcaggatgacatgcctatggtcaga
agagcagctgcatcaaatcttggaaagtttgctgccacagttgaacagagtcatctgaag
acagaaataatgtctatatttgatgatttaacccaagatgatcaagattcagtgcgtttg
ttggctgttgaaggctgtgctgcacttggtaaattgttggaaccacaagattgtgcagct
catattctcccagttattgtcaatttctcccaggataaatcctggcgtgttcgttatatg
gttgccaatcaattgtatgagctttgtgaggctgttggccctgagcctacgagagctgat
ttagtacctgcatatgttcgtctccttcgtgacaacgaggctgaagtgcggatagcagct
gctggaaaagttactaagttctgtcgcatattaagtccacagcttgcaatccagcatatt
cttccatgtgttaaggaattgtcatcagattcgtcccagcatgttcgttcagctttggct
tcagtcattatggggatggctcctgtgttggggaaggatgctaccattgaacaacttctt
cctatttttctttctttgttgaaggatgaatttcctgatgttcgactcaacataatcagc
aaacttgatcaagttaatcaggttattggaattgatttgctgtctcaatcactgctacca
gccattgtagaacttgcagaggataggcactggagagtccggcttgcaataattgagtac
atcccattgttggcaagtcagttaggtgtcgggttttttgatgacaagttgggggcactc
tgcatgcaatggttggaagataaggtcttctcaatcagagatgctgctgctaacaacttg
aagcggcttgcagaggagtttggtcctgagtgggcgatgcagcatataattcctcaggtg
ctggaaaagatcaacaacccgcactacctgtatcgcatgacaattctggaagctatctca
ttgctggcccctgtaatgggtgcagaaatcacctgtcaaaagctgcttccagtcgtcatt
aattcctcaaaggacagggttcctaacatcaagttcaatgttgcaaaagtactgcagtcg
cttataccgatccttgatcaatccgttgtggagaagaccgtgaggccatgccttgttgag
ctcagcgaggatcctgatgtggatgtaagatactatgcaaaccaggcactgcaggtgtgc
gatcaaatgatggtgtcaagctaa
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