Panicum hallii (Hall's panicgrass): 112883531
Help
Entry
112883531 CDS
T07366
Name
(RefSeq) ribosomal RNA small subunit methyltransferase-like
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112883531
Enzymes [BR:
phai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
112883531
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112883531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
Methyltransf_23
FtsJ
PrmA
PCMT
MTS
CMAS
PRMT5
Alpha-2-MRAP_N
Motif
Other DBs
NCBI-GeneID:
112883531
NCBI-ProteinID:
XP_025804625
LinkDB
All DBs
Position
1:3823056..3824792
Genome browser
AA seq
359 aa
AA seq
DB search
MAGGKIQKKRHGAAGGAGGGGARLQGGIPFEKSKGQHILRNPALVDSIVAKAGLKPTDTV
LEIGPGTGNLTKRLLEAGVKAVVAVELDPRMVLELNRRFQGHPLSSRLKVIQGDVLKCDL
PYFDICVANIPYQISSPLTFKLLSHRPIFRCAVIMFQREFAMRLVAQPGDSLYCRLSVNV
QLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRICFNRKNKTLG
SIFKQKRVLELLEKNYKTMQSLQLTQDAEMGEEKMSADDVALLANMVEDLSMEAGDEKED
DEMEMDDADMEGEGAASFKEKIMGILQQGDFAEKRGSKLSQVDFLYLLSLFNKAGIHFS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggcaagatccagaagaagcgccacggcgcggcggggggcgccggcggaggg
ggcgcccggctgcagggcgggatcccgttcgagaagtccaaggggcagcacatcctgcgg
aaccccgcgctggtggactccatcgtcgccaaggccgggctcaagcccaccgacaccgtc
ctcgagatcgggccgggcacaggaaacctcaccaagcgcctgctcgaggcgggggtcaag
gccgtcgtcgccgtcgagctcgacccgcgcatggtgctcgagctcaaccgccggttccag
gggcacccgctctcctcgcgcctcaaggttatccaaggagatgtcctcaaatgtgatctc
ccatactttgacatatgtgtggcaaacatcccgtaccagatctcatctccccttacgttc
aagcttctgtcacaccgtccaatctttaggtgtgctgtgatcatgtttcaacgggaattc
gccatgagacttgtggcacagcctggagacagtctctactgtcgtctctccgtgaacgtg
cagctcttgtcacgagtgtcacatctcctcaaggttgggaggaacaactttaggcctccg
cccaaggttgattcatcagttgtgcgtatcgagcccaggaagcccctccctcctgtcagt
ttcaaggagtgggatggacttgtcaggatctgtttcaaccggaagaacaagaccttgggc
tccatcttcaagcagaaacgcgtccttgaattgctagagaagaactacaagactatgcag
tctctccaacttactcaagatgcagaaatgggcgaggagaagatgtctgcagatgacgtt
gcgttgctagctaatatggttgaagatctgagcatggaggccggtgatgagaaggaagat
gatgagatggaaatggatgatgcggacatggagggagaaggtgctgccagctttaaagaa
aagattatgggtatattgcagcagggtgattttgcagaaaagagaggttccaagctaagc
caagttgatttcttatacttgctgtctctcttcaacaaagccggtatacatttttcgtga
DBGET
integrated database retrieval system
