Panicum hallii (Hall's panicgrass): 112883910
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Entry
112883910 CDS
T07366
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112883910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112883910
04147 Exosome [BR:
phai04147
]
112883910
04090 CD molecules [BR:
phai04090
]
112883910
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112883910
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112883910
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112883910
CD molecules [BR:
phai04090
]
Proteins
112883910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_22
AAA_29
AAA_21
AAA_16
Zeta_toxin
AAA_30
RsgA_GTPase
DUF87
AAA_15
AAA_23
P-loop_TraG
DUF815
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
112883910
NCBI-ProteinID:
XP_025804963
LinkDB
All DBs
Position
3:complement(12666199..12672354)
Genome browser
AA seq
1212 aa
AA seq
DB search
MLVGMVGALGSGMSMVVMTIIFGQMIDAFGAATPDTIVHRVNKAVLNFIYLAIGTGLASF
IQVSCWTMTGERQATRIRSLYLKSVLRQDMTFFDVETTTGQIVSSISADTTLIQGAIGEK
VGRFLQLVTTFFGGFVLAFIKGWLLTLVMLSTIPPFIAAAGIVAKMLSKISSQGLASYSD
AGDIVEQTIGSIRTVVSFNGEKKAIALYNNLIKKAYKGAVKEGAVQGFGMGLLSLLYFST
IGLIIWYGSKLSITKGYSGADILNVMFAIMIGARSLGDATPCIASFEEGRVAGNRLFKTI
KRRPEIDYEDSTGIVLEDIKGEVELKDVFFSYPGRPDQLIFDGFSVHVSSGTTMAIVGES
GSGKSTVINLVERFYDPQAGEVLIDGINIKNFRLDWIRGKIGLVSQEPLLFMTSIRENIT
YGKEDATFEEIKRAAELANAASFIENFPNGYDTTVGQRGAQLSGGQKQRIAIARAILKNP
KILLLDEATSALDLESERIVQDALNRIMVGRTTLVVAHRLSTVRNAHCISVVSKGKLVEQ
GHHDELVKDRNGAYSQLIQLQETQQENDRKSDARLSGSASKKSGSPRRSVSRSSGGSSRH
SLSLPFGVPGPTELLEYTFADGARQNENTDGKVPNKAPIGRLISLNKPEAAVLLFGSIVA
AIDGAIYPTLGLALASAAKIFYEPPDQQRKDSTFWALLCVVMGAISMVSKLVNCFLFAIA
GGKLIERIRALTFQSIVHQEVAWFDHPENSSGALNGRLSIDALNVRRLVGDNLALLVQSI
ATLICGIVIAMVADWKLSLVILFVIPLVGLQGYAQVKFLQGFSQDAKEASQVATEAIGSI
RTVASFCAEKRVMEKYNQKCQASRDQGIRTGIVGGLGFGFSYLMLYASSALCYYVGAKFV
SQGKSTFGDVFKAYFALVLAMIGVSQTNAMASDSAKANDSAISIFSILDRKSQIDSSSEE
GSTLANVKGDIDFKHVSFKYPSRPHVQIFTDFTLGIPSGKAVALVGQSGSGKSTAIALLE
RFYEPDSGAILLDRVEISSLKISWLRDQMGLVSQEPVLFSGTIRDNIAYGKHEEVTEEEI
AVAARAANAHEFISSMPQGYNTTVGERGTQLSGGQKQRIAIARAILKDPRILLLDEATSA
LDAESERIVQDALDRVMIGRTTIIVAHRLSTIQGADMIAVLKDGVIVEKGSHETLMGVSG
GAYASLVELRTM
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcggcatggttggggcgttgggcagcggcatgtcgatggtggttatgacgatc
atattcgggcagatgattgatgcctttggggctgcaaccccggacaccattgttcatcga
gttaacaaggcagttctaaacttcatttacttggccattggaacagggttggcttctttc
atccaggtatcatgctggacgatgactggtgagaggcaggctactcgtattcgatctttg
tatctcaaatcagtcctcagacaggatatgacattcttcgatgtagaaacgacgactgga
caaatagtctccagtatatctgctgacacgactctaattcagggtgctattggtgagaag
gtcggcagatttctacagcttgttacaactttcttcggtgggtttgtgctggcgttcatc
aaaggctggctcctaactcttgttatgctttctacgataccaccatttattgctgctgct
ggaattgtcgcaaagatgctgtccaaaatatctagccagggcctagcatcatacagtgat
gcaggtgatatagtagaacaaacaattggctccataagaacggttgtttccttcaatggt
gaaaagaaagctattgccctgtacaacaatctcataaagaaggcatataaaggagcagtc
aaggaaggggctgtccaaggctttggcatgggtttactatcattattatatttctccacc
attggattgattatatggtacggcagcaagttaagcatcaccaaaggatatagtggagca
gatatcctaaatgtcatgtttgcaatcatgattggtgctagatctttaggtgatgcaacc
ccctgcatagcttcctttgaggaaggaagagttgcgggtaacagattgttcaaaacaatc
aagaggagaccagaaattgactacgaggatagtactggcattgtattagaggacatcaag
ggtgaagtagaactgaaggatgtgttcttcagctacccaggcaggccagatcaactgata
tttgatggattttcagtgcatgtatcaagtggcacaacaatggccatagtcggggagagt
gggagtggaaagtcaactgtgatcaatctggttgagagattttatgatccacaggctgga
gaggttttaattgacggaataaacataaaaaatttcaggctagactggataagagggaag
attggccttgttagccaggaaccactgcttttcatgacatccatcagggagaatattacc
tatggaaaagaagatgcaacctttgaagaaatcaagagagcagctgagctcgcgaatgca
gcaagcttcattgagaacttccctaatggttatgacacaacagttggacaacgaggtgct
cagctttccgggggacagaagcagaggattgcaatcgcgagagccatccttaaaaatcca
aaaattcttttgcttgatgaagcaactagcgcattggatttggagtctgaaaggatagtc
caagatgcactaaataggatcatggtggggagaaccacacttgttgtggcgcaccgtttg
agcactgtaagaaatgctcactgcatctcagttgtttctaaaggaaaattagtagaacaa
ggacatcatgatgaattggtaaaggatcgtaatggagcatactctcagcttatacagcta
caagagacacaacaagaaaatgaccgtaagtcagatgctagattatcaggctcagcatct
aaaaagagcgggtcacccagacgatcagtaagtagaagttcaggagggagcagccgtcat
tctttaagtcttccctttggtgttcctgggcccactgaactactggaatatacctttgca
gatggtgccagacaaaatgaaaacactgatggcaaggtaccaaataaagcaccaatagga
cgcctaattagcctaaacaaaccagaggctgcagttcttctatttggatctattgtagca
gcaattgacggagctatctatccaacacttggtttagcattggctagtgctgctaaaata
ttttatgagccaccagaccagcaacggaaagattctaccttttgggcattgctgtgtgtt
gtgatgggtgcaatttctatggtatcaaaattagtaaattgctttctgtttgcaatagct
ggtgggaagcttatagaacgaatccgagctttgacattccaaagcatagtgcaccaagaa
gttgcttggtttgatcatcctgaaaattccagtggagcacttaatggaaggctatctatt
gatgcacttaatgtaagacgtctagtgggagataacttggccttactggtccaaagtatt
gcaacacttatttgtggaatagtaattgcaatggtcgcagactggaagctttcattggtg
atcttatttgtaattcctttagtgggtctccagggttatgctcaagtgaagttcctacag
gggttcagtcaagatgctaaggaagcaagtcaagtggcaactgaagcaatcggtagcatc
agaacagtagcatcattttgtgcggagaagagagtgatggagaaatacaatcagaaatgc
caagcttctagggatcagggaattcgaactggaatagttggaggccttggttttggtttc
tcatatctgatgttatacgccagctctgctctttgttactatgttggtgcaaagtttgtt
agtcagggaaaatccacttttggtgatgtcttcaaggcttactttgctttagttttagcc
atgattggagtatcacaaacaaatgctatggcttctgactcagctaaggcaaatgattct
gctatttccatattctcaatcttagatagaaaatcccaaattgattccagcagcgaagaa
ggttcaaccttggcgaatgtcaagggcgacatcgattttaagcatgtcagcttcaaatac
ccatcccgtccgcatgttcaaatattcactgacttcaccctgggcattccctctggaaag
gcagttgcactcgttggtcaaagtggcagtggcaagtctacggcgatagctttactagag
cgcttctatgaacctgattctggtgcaattttattagatagagtggaaattagtagccta
aagatcagttggttgagggaccagatgggattggtaagccaagaaccagtgcttttcagt
ggaacgatccgtgataatatagcttacgggaagcatgaagaggtaacagaggaagagatt
gctgtggccgctagagcagcgaatgcccatgaattcatctcaagcatgccacaggggtac
aatacaactgtcggagagagaggaacacaactgtcaggtggccaaaaacagcgaatagct
atcgcgagggctatcctgaaggacccaaggatacttctcctagacgaggcaacaagcgca
ttagatgctgaatcagagcgcattgttcaggatgcattggatcgtgtgatgattggcagg
acaaccatcattgtcgcacaccgcctttcaacaatccaaggagctgatatgatcgcagtt
ctaaaggatggcgtaattgtggagaaaggaagccacgaaacactgatgggcgtctctggt
ggagcttatgcttcacttgtggagcttcgcaccatgtaa
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