Panicum hallii (Hall's panicgrass): 112884844
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Entry
112884844 CDS
T07366
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00270
Cysteine and methionine metabolism
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
112884844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112884844
03032 DNA replication proteins [BR:
phai03032
]
112884844
03036 Chromosome and associated proteins [BR:
phai03036
]
112884844
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
phai02048
]
112884844
Enzymes [BR:
phai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
112884844
Transcription factors [BR:
phai03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112884844
DNA replication proteins [BR:
phai03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
112884844
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112884844
Prokaryotic defense system [BR:
phai02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
112884844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
112884844
NCBI-ProteinID:
XP_025806233
LinkDB
All DBs
Position
3:4904894..4914526
Genome browser
AA seq
1289 aa
AA seq
DB search
MEPPPPDPTSPPAISPPAAAEGSSPSPGGGDGAAGGFSAGLEPLWSLLFGDPAELEPMWS
PPRDFGVGVAAGFAAPEPDADEGDAEGPWDGAPWRSTGIVAGEGAAAGFPEFEPAAEAST
GGAALEVRPLDYSAPDSASPVPPCSPAPVPLEVRAPDLIPSWDEPALPPAAVSSEAKLEE
CTLNSVPSPPAPPSPDDPDLGAEDGPNDGSSSQKITSGAIVVVGLTAAERPEVNAASCSM
PDVVGRDCTPLRRSPRIVAAKAKASAASLERNADSSRASKLRLAVSGRSSISEGSSFEET
TTVAPIKPVDFLDGLKPQGSREIVAVQSSSTNVVVALPVVNKRSSKNKAVSVSSPRKTRS
ASKVLVNSNRVSAVSPAMNCGPVKKAASHIPPRKHKLASEKCLPSLERVDAVLHNSGLAS
AKKVEMPLELQAAASQPPKAKRARVSSGKCSSNLRRAENNSTPICKLPMVTVTSDPENKP
KLILDKYSTDSEMVDSEDGSCFFMGEAVPDEEARQRWPNRYQSNHCLLKKDKWSNTQTFS
NAGKAVLDVKCHYLQASVCGSTLCIGDCAFIKGPEGKPHYIGRLLEFFETSAGEYYFSVQ
WFFRAEDTVMEDQAQSHDPRRLFYSDLKDDNLLDCIVSKVTIVQVSPSVNEKSQSIPSFH
YYYDMKYSLDYSTFSTMEMGHANDTLQSHYTSRNNNNVKRIDSTEKQKSPAPEMKELSLL
DLYCGCGGMSTGLCLGARGGGVNLIARWAVDGDEAACESFRLNHPETRVRKETTDDFLEL
LKEWEKLCKTYVKLCSKLKSRSSFSAQSSNETPECSTIIPPEEFEVWKLVDICFGDPNGV
GKRGLYFKVRWKGYGPNDDTWEPTEGLKNCKEAIRDFVIQGHKEKILPLPGDVDVICGGP
PCQGISGYNRNREFDAPFNCERNKQIIVFMDVMQFLKPKYIYMENVLDILKFADATLARY
ALSRLVAMHYQAKLGIMAAGCYGLPQFRMRVFLLGCHPKEKLPPFPLPTHEAIVKNGCPL
AFERNLVGWPDGMPMQLEKPIVLEDALSDLPEVANGEKREEMLYLKGPQTEFQRYIRSFN
SEVLGSRAQVTRESKSKLYDHRPRALDDDNYLRVLQIPKKKGANFRDLPGVIVGPDNVAR
LDPTKERILLPSGNPLVIDCVLTYEHGKSLRPYGRLWWDEVVGTVLTSPNARMQALIHPA
QDRLLTIRESARLQGFPDSFRFRGTVKDRYRQIGNAVAVPVGRALGYALAMAILNKTGDD
PLMVLPPKFAFSHEVQGLSSPNSLQSGNI
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggagcccccgccccccgaccccacctcgccgccggcgatcagcccccccgccgccgct
gagggctcctccccgtcccccggaggcggcgacggggcggcgggcgggttcagcgcgggg
ctggagccgctctggtcactccttttcggcgaccctgcggagctggagcccatgtggtcg
ccgcccagggacttcggcgtcggcgtcgccgcggggttcgccgccccggagccggacgcc
gacgagggcgacgccgaggggccctgggacggcgcgccgtggcgctccaccggtatcgtc
gccggcgagggagcggccgccgggttcccggagttcgagcccgccgcggaagcttccacg
gggggagccgcgctagaggtgaggccgctcgattattccgcccccgattctgcttcgccg
gtgccaccgtgctccccagctccggtgcctttagaggtgcgtgcgcccgacctgatcccc
agctgggacgagcctgcgctaccgccagcagcggtttcttcggaagccaaactagaggag
tgcaccctcaactcggtgccatcgccgccggccccgccttctccggatgatcctgatttg
ggggcagaggacggtcccaatgacgggtcctcttcgcagaaaatcacctcgggagccatc
gtggttgttggtctgactgcggcggaacgtcctgaggtcaatgcagctagctgcagtatg
ccagatgttgttggcagagattgcacacctctccggaggtccccgaggattgtggcagcc
aaggccaaagcaagtgccgcatctttggaacggaatgccgactcatctagagcttccaag
ctccggttagcagtttctgggcggagcagcatcagtgaagggagctcatttgaggagaca
accacggttgctccaataaagccagttgacttcctcgatgggttgaagccgcaaggatca
cgagagattgttgcagtgcaaagctcctctaccaatgttgtggtggctttaccggtggtg
aacaaaaggtcctcgaagaacaaagcagtgtctgtgtcctctccaaggaaaactagatca
gcctcaaaggtattagtgaattctaacagggtatcagctgtttcgccagcgatgaattgt
gggcctgtgaaaaaagcagcttctcatatacctcctaggaagcacaagcttgcttctgag
aagtgcttgcccagtttggagagagtggatgctgtgttacacaactctgggttagcaagt
gctaagaaagttgagatgcccttagagctccaggcagcagcatctcaacctccaaaggca
aagcgggccagggtatcctcagggaaatgctcatcgaacttgaggagggcagagaacaat
agtaccccaatctgcaaactgccaatggtcacggtgacctcagatccagagaataagcct
aaacttatattggataagtattctactgattctgaaatggtggatagcgaggatggttcc
tgtttctttatgggtgaggcagtgcctgatgaggaggctaggcagaggtggcctaaccgc
tatcagagcaatcattgccttctgaagaaggataagtggagcaacacccaaacgttttcc
aatgctggcaaagctgtcttggatgtcaaatgtcactatttgcaagctagtgtatgtgga
tctactttatgtattggggattgtgcatttattaagggtccagaaggaaaaccacattat
attggcaggttattagaattctttgaaacgagtgcaggtgaatattacttcagtgtgcag
tggtttttcagagctgaagacacggtcatggaagaccaagcacagtctcatgacccaagg
aggctcttttactcagacctgaaggacgacaatttactagactgcattgtttctaaagtg
acaattgttcaagtttctcctagtgtaaatgaaaagtctcaatcaattccttcgttccat
tactactatgacatgaagtactctctggactatagtacattctctaccatggaaatggga
catgcaaatgacacattacagtcacattacactagtaggaacaacaacaatgtgaaaagg
attgattccactgaaaagcagaagtctccggcaccagagatgaaggagctctccctgtta
gatctgtactgtggttgtggggggatgtcaactggactttgtcttggggctcgtggtggt
ggtgtgaatcttatagcgagatgggctgttgatggcgatgaagctgcctgcgaaagcttc
agactgaatcatccagaaactagggtccggaaggaaaccaccgacgatttccttgagttg
ttgaaggaatgggaaaagctatgcaaaacctatgtgaagctttgcagtaaattaaagtcc
cgttccagcttttcagcacaatccagtaatgaaactccagagtgttctacaataatccct
cctgaagaattcgaagtatggaagctagttgatatttgctttggggatccaaatggtgtc
ggaaagcgtggcttatactttaaggtccgttggaaaggttatggccctaatgatgacaca
tgggagccaactgaagggttaaagaactgcaaagaggcaattagggattttgttattcaa
gggcataaggaaaaaatattacctcttcctggtgatgtggatgtcatatgtgggggacca
ccatgccaaggcattagtggctacaaccgcaatagagaatttgatgcaccattcaactgt
gagagaaacaagcagattattgtcttcatggatgtaatgcaatttttgaagcccaaatac
atttatatggaaaatgtccttgatatattgaagtttgctgatgcaacacttgcaagatat
gctctaagccggctagttgctatgcattaccaagcaaaactaggtatcatggctgctggg
tgttatggcctcccacaattccgaatgcgagtatttttgttgggctgtcatcctaaggag
aaattgcccccgtttcctcttcctactcatgaggcaattgtgaagaatggttgcccattg
gctttcgagcgtaatttggttgggtggcctgatggcatgccaatgcaactagaaaaacca
attgttcttgaagatgctttatctgatctgccggaagtggcaaatggagaaaaacgtgaa
gaaatgctatatctaaagggaccacagacggaattccaaagatacattcggtcatttaat
tctgaagtgcttggatccagagctcaggtcaccagagagtccaagtcaaaattgtatgac
catcgaccaagggcactagatgatgataactacctaagagtattgcagattcccaagaaa
aagggagctaattttagagaccttccgggagtcatagtaggtcctgacaacgtagctaga
ttagatccaactaaggagagaatacttttgccttctggtaatcctctggtgattgattgt
gtgctaacctacgaacatggtaaatcattaagaccatatggtcgactatggtgggatgag
gtagtgggaaccgtgctgacatctccaaatgctcgcatgcaggccttaatacatcctgca
caagacagactgctaactattcgtgaaagcgctcgtttacaaggttttcctgacagcttc
aggtttcgtggaacagtcaaagacaggtatcgccagattggaaatgcagtagcagtacct
gtcggccgcgcacttgggtatgccctggccatggccattctgaacaagactggagatgat
cctctgatggtgttgccacccaagtttgcattctctcatgaagtgcaaggtctttcaagt
ccgaacagtcttcagagtggcaacatctaa
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