Panicum hallii (Hall's panicgrass): 112891201
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Entry
112891201 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112891201 isoform X1
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00260
Glycine, serine and threonine metabolism
phai00400
Phenylalanine, tyrosine and tryptophan biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
phai01230
Biosynthesis of amino acids
Module
phai_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112891201
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
112891201
Enzymes [BR:
phai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
112891201
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
112891201
NCBI-ProteinID:
XP_025813922
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Position
4:5260491..5263742
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AA seq
496 aa
AA seq
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MGAGASSTGSVRRTATCARPEHRASLLCTPKHRVAAGGRRSLSFAARAGLSSGAKVSIPK
QWYNLVADLPVKPPPPLHPQTHQPLDPSDLAPLFPDELIRQEVTDERFVDIPEEVVDVYE
LWRPTPLIRARRLEKLLGTPAKIYYKYEGTSPAGSHKPNTAVPQAWYNAAAGVKNVVTET
GAGQWGSALSFASSLFGLNCEVWQVRASFDQKPYRRLMMETWGAKVHPSPSEATAAGRGI
LAADPASPGSLGIAISEAVEVAATNADTKYCLGSVLNHVLLHQTVIGEECLEQLAALGEA
PDVVIGCTGGGSNFGGLAFPFMREKLAGRMSPEFRAVEPAACPTLTKGVYAYDFGDTAGL
TPLMKMHTLGHGFVPDPIHAGGLRYHGMAPLISHVYELGFMDAVAIQQTECFQAALQFAR
TEGIIPAPEPTHAIAAAIREALECKKTGEAKVILMAMCGHGHFDLAAYEKYLRGDMVDLS
HPADKLEASLAAVPKI
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgggcgcgtcgtcgacgggctccgtgcgccggacggcgacgtgtgctcggcca
gagcacagagcttcactgctctgcacgcccaagcacagggtcgctgccggtgggaggagg
agcctgagcttcgccgcgagggccggcctgagctcgggtgccaaggtgagcatcccgaag
cagtggtacaacctcgtcgccgacctgccagtgaagccgccgccgccgctgcacccgcag
acgcaccagcccctggatcccagcgacctggcccccctgttccccgacgagctgatccgg
caggaggtcaccgacgagcggttcgtcgacatacccgaggaggtcgtcgacgtgtacgag
ctctggcgcccgacgccgctcatcagggccaggaggctggagaagctgctcggcacgccg
gcgaagatctactacaagtacgaggggaccagcccggcggggtcgcacaagcccaacacc
gccgtgccgcaggcgtggtacaacgccgcggcgggggtcaagaacgtggtcaccgagacc
ggcgccggccagtggggcagcgcgctctccttcgccagcagcctcttcggcctcaactgc
gaggtgtggcaggtgcgcgcgtcgttcgaccagaagccgtaccggaggctgatgatggag
acgtggggcgccaaggtgcacccgtcgccgtcggaggcgacggcggccggcagggggatt
ctggcggcggacccggccagcccgggcagccttgggatcgccatctcggaggcggtggag
gtggcggccaccaacgccgacaccaagtactgcctgggcagcgtgctcaaccacgtcctg
ctccaccagaccgtcatcggcgaggagtgcctggagcagctggcggcgctcggcgaggcg
cccgacgtcgtgatcggatgcaccggcggcgggtccaacttcggcgggctcgcgttcccg
ttcatgcgcgagaagctcgccggccggatgagcccggagttcagggccgtggagcccgcg
gcgtgccccacgctcaccaagggcgtctacgcctacgacttcggcgacacggccgggctc
acgccgctgatgaagatgcacacgctcggccacggcttcgtccccgacccgatccacgca
ggtgggcttcgctaccatggaatggcacctctgatctcgcacgtgtacgagctggggttc
atggacgccgtcgccatacagcagactgaatgcttccaagcggcgttgcaattcgcccgg
acggagggcatcatcccagcgccggagccgacgcacgcgatcgcggcggcgatccgggag
gcgctggagtgcaagaagaccggggaggcgaaggtcatcctgatggccatgtgcggccac
ggccacttcgacctcgccgcgtacgagaagtacctgaggggcgacatggtcgacctgtcg
cacccggccgacaagctggaggcgtccctcgccgccgtgcccaaaatctga
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