Panicum hallii (Hall's panicgrass): 112892315
Help
Entry
112892315 CDS
T07366
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00900
Terpenoid backbone biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112892315
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
phai01006
]
112892315
Enzymes [BR:
phai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112892315
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112892315
Prenyltransferases [BR:
phai01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112892315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
112892315
NCBI-ProteinID:
XP_025815262
LinkDB
All DBs
Position
5:complement(11503076..11507346)
Genome browser
AA seq
355 aa
AA seq
DB search
MATAGVAVTNGSGGADTTAAFKEIYSKLKVEMLEDPAFEFTDESLQWIDRMVDYNVLGGK
CNRGISVIDSYKILKGADVLSKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPC
WFRVPQVGLIAVNDGIILRNHISRILQRHFKGKPYYVDLIDLFNEVEFKTASGQLLDLIT
THEGEKDLSKYNLTIHRRIVQYKTAYYSFYLPVACALLLAGENLDNFGDVKTILVEMGTY
FQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALDRADEDQKRILFENYGKSDPACV
AKVKDLYKELNLEEVFHEYERESYTKLIADIEAQPNKAVQTVLKSFLHKIYKRDK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcgggggtggcggtgaccaacggctccggcggcgccgacacgacggccgcg
ttcaaggagatatacagcaagctcaaggtggagatgctcgaggaccctgccttcgagttc
accgacgagtcgctccagtggatcgaccgcatggtggattacaatgtgctcggaggaaag
tgtaaccgcgggatctcagtcattgatagctacaagatattgaagggtgctgatgttctg
agcaaggaggagacatttcttgcatgcacccttggttggtgtattgaatggcttcaagct
tattttctggtgcttgatgatatcatggacaactcccagacacgacgtgggcagccttgc
tggtttagggtgcctcaggttggcctcattgctgtaaatgatgggattatccttcgcaat
catatttcacggatccttcaacgccacttcaaaggaaagccatattatgttgatctcatt
gatttgttcaatgaggttgagttcaagactgcttcagggcagttgttggatcttatcact
actcatgagggtgaaaaggatctaagtaaatataacttgacgattcaccgacgcatcgtt
caatacaagacagcctactattcattttatctccctgttgcatgtgcacttctgctagct
ggtgagaacttggataactttggtgatgtaaagaccattcttgttgaaatgggaacatat
tttcaagtccaggatgattatctagattgttatggtgatcctgaattcattggcaagatc
ggaactgatattgaagactacaagtgttcttggttagttgtgcaagctcttgaccgtgct
gatgaggaccaaaagagaatcctatttgaaaattatgggaagtctgatccagcatgtgtt
gcaaaggtgaaagacttgtacaaagagcttaatctggaggaggttttccatgaatacgag
agggagagctacaccaagctgatcgccgacatcgaggcccagccgaacaaggcggttcag
acggtgctgaagtccttcctgcacaagatctacaagagggacaagtag
DBGET
integrated database retrieval system
