Panicum hallii (Hall's panicgrass): 112897560
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Entry
112897560 CDS
T07366
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112897560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112897560
04147 Exosome [BR:
phai04147
]
112897560
04090 CD molecules [BR:
phai04090
]
112897560
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112897560
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112897560
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112897560
CD molecules [BR:
phai04090
]
Proteins
112897560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_22
Zeta_toxin
AAA_21
AAA_15
ABC_ATPase
DUF87
AAA_23
nSTAND1
APS_kinase
DUF815
SRP54
AAA_25
AAA_28
Motif
Other DBs
NCBI-GeneID:
112897560
NCBI-ProteinID:
XP_025821681
LinkDB
All DBs
Position
1:46827755..46834358
Genome browser
AA seq
1238 aa
AA seq
DB search
MATAKEDAPSPAPGSSFMSVFAHADAADVALMVLGLVGAMGEALSTPVRMLIFSHIANDL
GNGPDQLQQFSSKINENVRKLVFLAFASSIMAFLEGYCWARTAERQASRMRARYLRAVLR
QDMEFFDLRAGLASEVVASLTNDSLAVQHVLSERVPNLVMNATMFVGSYAVAFVLLWRLA
LAAMPSVLLLVVPGVMYGRVLTGLAGRIRERYARAGAVAERAVSSVRTVYSFVAETGAVA
RFSAALEEPARLGLRQGLVKGVAVGSNGVTFAVWAFNVWYGSRLVMYRGCQGGTVFAVST
AIVGGGTALGWGLSNVKYFSEASAAAERIMEMIRRVPKIDSESDTGVELDNVAGELELKN
VTFYYPSRSQSPVFFNLSLRVPAGHTVALVGASGSGKSTVIALLERFYDPSAGEVMLDGV
DIRRLRLKWLRAQMGLVSQEPALFATTIRQNILFGKEDATEEEIVAAAKVANAHDFISQL
PQGYETQVGERGIQMSGGQKQRIAIARAILKSPRILLFDEATSALDSHSECVVQEALEVA
SMGRTTLVIAHCLSTIRNADMIAVMQSGEVKELGSHDELIANENGLYSSLVHLQWIGDTS
GEANRQIGRIGYTPASVRKPAGSHDMSRILCFDNRLIGDGGGDDSTEKPKVRVPSFKRLL
MLNAPEWKHALIGSFSAALFGGIQPMYAYIIGSMFSVYFLTDHAEIKNKTRDHAFIFVAL
AALSLLLNIGQHYNFGAMGEYLTKRIREQILEKILTFEIGWFDQDENSTGVICSLLAKDA
NIVRALVGDRMALVIQAVSAVLIAWTMGLFIAWRLALVMIAVQPLIICCFYARNVLLRSV
SNRSKEAQSKSSKLSFEVVSNLHTITAFSSQDLILRLFDQAQYITRKENIRQSWFAGLAL
GTSVGLMACTWPLNFWYGGKLMAGHHITAKALYQTFMIIVSTGRVIADAGSMTTDLAKGA
EAVASVFAILDRKTKIEPDNSKGYKPEKLKGDVQIVGVDFAYPSRPNVIIFREFSLSIQP
GKSTAIVGQSGSGKSTIVGLIERFYDPHQGVVKIDGIDIKMYNLRALRRHIGLVSQEPTL
FAGTIRENIMYSIETASETEIENAARSANAHEFISSLKDGYDTWCGERGLHLSGGQKQRI
AIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMIGRTSVVVAHRISTIQKCDLIV
VLEKGAVVEKGTHTSLIAKGPSAKYFGLVSLQQGGNRH
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaaaggaagacgcaccgtcaccagcgccagggtcgtcgttcatgtcagtg
ttcgcgcacgcggacgcggcggacgtggcactcatggtcctgggcttggtgggcgccatg
ggcgaagccctgtcgacgccggtgaggatgctcatcttcagccacatcgccaacgacctc
ggcaatggccccgatcagctccagcagttcagctccaagatcaatgagaacgtgaggaag
ctcgtcttcttggcctttgcctcctcgatcatggcgttcctagagggctattgctgggcg
cgcacggcggagcggcaggcgtcgcgtatgcgggcgcggtacctgcgggcggtgctccgg
caggacatggagttcttcgacctcagggcgggcctggcgtcggaggtggtggccagcctg
accaacgacagcctcgccgtgcagcacgtgctgagcgagagggtgcccaacctggtgatg
aacgccaccatgttcgtcggcagctacgccgtggcgttcgtgctgctgtggcgcctcgcc
ctcgccgcgatgccgtccgtgctgctcctcgtcgtccccggcgtcatgtacggccgcgtc
ctcaccggcctcgcgggccggatcagggagcggtacgcgcgcgcgggcgccgtggccgag
cgggccgtgtcgtccgtgcgcacggtgtactcgttcgtggcggagacgggcgccgtggcg
cggttctccgccgcgctcgaggagcccgcgcggctcgggctcagacaggggctcgtcaag
ggcgtcgccgtcggcagcaacggcgtcaccttcgccgtctgggcgttcaacgtctggtac
ggcagccgcctcgtcatgtaccgcggctgccagggcggcactgtcttcgccgtctccact
gccattgtcggcggcggcacggcgctggggtgggggctgtcgaacgtcaagtacttctcc
gaggcgagcgcggcggcggagagaatcatggagatgatccggcgggtgcccaagatcgac
tccgagagcgacaccggcgtggagctggacaacgtcgccggggagctggagctcaagaac
gtcacgttctactatccgtcgcggtcgcagagccccgtctttttcaacctcagcctgcgt
gtgccggcgggccacacggttgcgctggtcggggccagtgggtcggggaagtcgacagtt
atcgcgctgctcgagcggttctatgacccgtcggccggagaggtaatgctggacggcgtg
gacatccggcggctacgcctcaagtggctccgcgcgcagatgggcctcgtcagccaggag
cccgcgctgtttgcaacgaccatacggcagaacatactgttcggtaaggaggacgccacg
gaggaggagatcgtcgccgcagcgaaggtggccaacgcccacgacttcatctcgcagctg
ccgcagggctacgagacacaggtaggcgagcgtggcatccaaatgtccggagggcagaag
caacggattgcgattgctagagcaatattgaagtcacccaggattctcctttttgatgaa
gccaccagtgcattggactcgcactcagagtgtgttgtgcaagaggcgcttgaagtagcc
tccatgggccgcactactcttgttatcgcacattgcctatcaaccatcagaaatgcagac
atgattgccgtcatgcagtctggggaagtaaaggagttaggctcccatgatgagctcatt
gccaatgagaatggcctctactcatctcttgttcatctccagtggattggggataccagt
ggtgaggccaacaggcagattggtagaattggctatacaccagcttctgtacgaaaacct
gctggcagccacgacatgagcaggatattatgttttgataacaggctaatcggtgatgga
ggaggtgacgatagtaccgagaagccaaaggttcgtgtaccatcctttaaaaggttgctg
atgcttaatgcaccagagtggaagcatgcactgatagggagctttagtgcagctctgttt
ggaggtatccagcccatgtatgcatacatcataggcagcatgttttcggtctatttcttg
acagatcatgctgagataaagaacaaaacaagggaccatgcgttcatctttgtcgctctt
gcggctctgtcgttattgctcaacattgggcaacattataactttggtgccatgggagaa
tatctcactaagaggatcagggaacaaatactcgaaaagattcttacttttgagattggt
tggtttgatcaagatgagaactccacaggtgtcatatgctccttgcttgccaaagatgcc
aatattgtgagggcacttgtgggtgaccgaatggcactagtgatccaggcagtttctgca
gtgctcattgcatggacgatgggtctttttattgcttggcgcttggcccttgtcatgata
gcagtgcagccacttattatttgttgcttctatgctcgtaatgtcttactaagaagcgtg
tcgaacagatcaaaggaggcacaatccaagagtagtaaactatcttttgaggttgtctca
aatctgcatactatcactgcattctcatcgcaagatcttattctacgcctttttgaccaa
gcacaatatataactcggaaggaaaacattcggcaatcatggtttgcaggacttgccctt
ggcacgtccgttggccttatggcatgcacatggcccctcaacttttggtatggtggaaag
ctcatggctggccaccacattacagccaaggcgctctatcaaaccttcatgattatagta
agcactgggcgtgtcattgcagatgcaggcagcatgacaactgaccttgctaagggtgct
gaagcggtcgcttcggtgtttgccattcttgaccgcaaaacaaaaattgagcctgacaat
tctaagggatacaagccagagaagctaaaaggtgatgtgcaaattgtaggagtagatttt
gcatacccatcaaggccaaatgtgatcatattcagagagttttccttgagcatacagcca
gggaagtcaacagccattgttgggcaaagtggttccggcaagtcaaccatcgtcgggctt
atagagcggttctatgacccacatcagggagtggtgaagatcgatggaatagacataaaa
atgtacaatctccgagccttgcgacggcacattggtttggtcagccaggagccaacattg
tttgcaggtacgatcagagagaacatcatgtatagcatagaaacagcaagtgagacagaa
attgagaatgcagcaaggtctgcaaatgcacatgaattcattagcagcctcaaggatggg
tatgacacatggtgtggtgagcgaggtttacatctttcgggaggacaaaagcagcgcatt
gcaattgctcgtgccatcctaaagaaccctgctatcttgctactagatgaagctacaagt
gccctggacagccaatctgaaaaggtggtgcaagaggcattggacagagtgatgatcggg
aggacaagtgtagtggtggcacatcgaattagcactatccaaaaatgtgacttgattgtt
gtgcttgagaaaggagctgttgtggagaaaggcacacacacatccctcattgccaagggt
ccctctgcaaaatactttggattggttagcttacaacaaggaggcaatcggcactga
DBGET
integrated database retrieval system
