Panicum hallii (Hall's panicgrass): 112903314
Help
Entry
112903314 CDS
T07366
Name
(RefSeq) 4-coumarate--CoA ligase-like 7 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00130
Ubiquinone and other terpenoid-quinone biosynthesis
phai00940
Phenylpropanoid biosynthesis
phai01100
Metabolic pathways
phai01110
Biosynthesis of secondary metabolites
Module
phai_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
phai_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
112903314
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
112903314
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
112903314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112903314
NCBI-ProteinID:
XP_025828340
LinkDB
All DBs
Position
8:complement(21008746..21011774)
Genome browser
AA seq
573 aa
AA seq
DB search
MAAQPHPGDPALHKCAQLAVAPIGESSMPPPAAEVDPRSGYCAATKTFHSLRAPLPLPPA
DLPLSFPSFMFSLLPAALPSRPALVDAATGEAVPFPAFLSGVRALATALRARLGISRGDV
AFVLAPPGVHVPVLYYALMAVGAVVSPANPTLTAGEISGLVALSGPSVAFAVKATAGKLP
PGLNTVLLDSARFLSFFHEARDEDGTAAGTDVVTHQSDPAAILYSSGTTGRAKAVVLTHR
NLMASNATRAAATVDVLMLAVPLFHVYGFTFCLRVAPSANTLVLHTAKRFDGREVLAAVG
RYGATRLALAPPALLAIVRAAEEEETLIARVATLQAVNCGGAPLATELFRRFLHKFPGVC
LLQGYGLTETTSGFCRAVGEEESAQIGSVGRLSWGAQAKVVHPETGVALPPGVPGELWVR
GPFVMKGYAGDEDSTSKILDSEGWLRTGDLCYIDKDGIVFVVDQLKELIKYKGYQVPPAE
LESLLQTHPDIDEAAVVPYPDDQAGELPVAFIVSCSGSNLHEAQIKEFVAKQVVHYKQIH
HVFFVNSIPKNAAGKILRMDLAKLTLQHIRSKL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagccgcaccccggcgaccccgccctccataagtgtgcccaactcgccgtc
gcaccaatcggcgaatcatccatgccgccgcctgcggccgaagttgacccccgcagcggc
tactgcgccgccactaagaccttccacagcctccgcgcgccgcttccgctgccgccggcg
gacctcccgctctcctttccgtccttcatgttctccctgctccccgccgcgctcccctcc
cgcccagccctcgtcgacgccgcaaccggcgaggctgtccccttccccgccttcctctcc
ggggtccgcgcgctcgccaccgcgctccgtgcccgcctgggcatctcccgcggcgacgtc
gcctttgtccttgcgccgcccggcgtccacgtccccgtgctctactacgcgctcatggcc
gtcggcgccgtcgtgtccccagccaatccgaccctcaccgccggcgagatctccggcctc
gtggcgctctccggcccctccgtcgccttcgccgtcaaggccaccgcaggcaagctccct
cccggcctcaacaccgtgctcctcgactccgcaagatttctttccttcttccacgaagcc
cgtgacgaggatggcacggccgctgggacagatgtggtgacccaccaatcggacccggcg
gcgatactctactcctccggcaccactgggcgcgccaaggcggtcgtgctgacgcaccgc
aacctcatggcctctaatgccacgcgggcggcggcgactgtggatgtgctgatgctcgcc
gtgcctctcttccacgtatacggtttcacgttctgcctcagggtcgcgccttcggcgaac
acgctagtgttgcacacggcgaagagattcgacggtagggaggtgctggctgcagtaggg
agatatggggcaacacggctcgcgctggcgccaccggcgctactggcaattgtgcgggcc
gcagaggaggaagagactttgattgctcgcgtggccacgctgcaggcggtgaactgcggc
ggcgcccccctcgcgactgagctctttcggcgcttcttgcacaaattccctggcgtgtgc
cttttgcaggggtatggtcttacagagactacatctggtttttgccgtgctgtcggagag
gaagaaagtgcacaaattgggtccgtgggtcgtctttcatggggtgctcaagcaaaggtt
gttcatcctgaaacaggggttgccctgcctcctggtgtgccaggggagctttgggtccga
gggccttttgtgatgaaaggttatgctggtgatgaggattcaacatctaagatcttggat
agtgaaggttggttgagaacaggagatctttgttatattgacaaagatggaatcgttttt
gttgttgatcagcttaaagagttaattaagtacaaaggctaccaggttcctcccgcagaa
cttgaaagcctgcttcagacacacccagatattgatgaagctgcagttgtgccataccca
gatgatcaggctggggagttgccggtagcattcatcgttagctgctcaggaagcaacttg
catgaagcacaaatcaaagaatttgtcgctaaacaggttgtgcactataagcaaatacac
catgtcttctttgtgaattcaataccaaaaaatgcagcgggtaagattttaaggatggac
ttggcaaagttaacattgcagcatattcggtctaagttatag
DBGET
integrated database retrieval system
