Parasphingorhabdus halotolerans: HF685_14655
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Entry
HF685_14655 CDS
T07423
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
phao
Parasphingorhabdus halotolerans
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phao03009
]
HF685_14655 (rimO)
Enzymes [BR:
phao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HF685_14655 (rimO)
Ribosome biogenesis [BR:
phao03009
]
Prokaryotic type
ribosomal protein modification factors
HF685_14655 (rimO)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QJB70354
UniProt:
A0A6H2DPU0
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Position
2986017..2987381
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AA seq
454 aa
AA seq
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MATTIPSPPKVGMVSLGCPKALVDSERILTQLRSDGYQMSADYAGADVVLVNTCGFLDSA
KEESLDAIGEAMAENGRVIVTGCMGNEADVIRARFPDVLAVTGAHQYEDVVSAVHEAAPA
ARGAFVDLVPDAGLKLTPRHYSYVKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEK
LVAAGTKELLIISQDTSAYGVDIKHKPQIWNGPIGQGREVRAHMTDLAEALGELGVWTRL
HYVYPYPHVDKVIPLMAEGKITPYLDIPFQHAAPNVLKRMKRPANEAKVLQRVKSWREIC
PDLTIRSTFVVGFPGETEDDFQYLLDWLDEAQLDRVGAFRFEPVEGAAANALDGALPEEV
KEERYQRLMEKTAAISTARLAAKVGRTLPVIIDEIGEPDEDGDLGATARSQADAPEIDGN
VFLRNVSAQLAVGDIVDAVIEDADEHDLFGACAV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaactactattccctcgccgcccaaagtgggcatggtctcgcttggctgtcccaag
gccttggtcgacagcgaacgcatcctcacgcaactaaggtccgatggctatcagatgtcc
gccgactatgcgggtgctgatgtggttctggttaacacctgcggttttctggacagcgcc
aaagaggaaagcctggacgcgatcggcgaagcaatggccgaaaatgggcgagttatcgtc
actggctgcatgggaaacgaagccgatgtaatccgcgctcgcttccccgacgtgctggcg
gttaccggcgcgcatcaatatgaagatgtggtgagcgccgtccatgaagcggctccggca
gctcgcggtgcgtttgttgatctcgtgcctgatgcaggcctgaaactgactccgcgccat
tatagttatgtgaagatttcagaaggctgcaatcatcgctgttcattttgtatcatcccg
tccttgcgcggtgacctggtatcacgacgccccgatgcgatcttgcgcgaagccgaaaaa
ctggtcgcggcgggcaccaaggaattgctgattatttcgcaggatacatcggcctatggc
gtcgatatcaagcacaaaccgcaaatctggaacgggccgattggtcagggccgcgaagtg
cgcgcgcatatgactgatcttgccgaagcgctcggcgaactgggtgtgtggacgcggttg
cactatgtctatccttatccgcatgtcgataaggtcatccccttgatggctgaaggcaag
attacaccctatctcgacattccgttccagcatgctgcacccaatgtgctcaagcgcatg
aaacgcccggccaatgaagccaaggttctgcagcgcgtgaaaagctggcgtgagatttgc
cctgatcttacgatccgttcgacctttgtggtcggctttccgggagaaaccgaagacgat
tttcaatatctgctggattggctggacgaagcccagcttgaccgtgttggcgcttttcgt
ttcgagccggttgaaggggctgccgccaatgctctcgacggagccttgccagaagaggtc
aaggaagagcgctaccagcgcctcatggaaaaaaccgccgcaatcagcaccgcgcgcctt
gccgcaaaagtggggcggaccctgccagtcatcatcgatgaaatcggagagccggacgag
gatggcgacctgggtgcaaccgcgcgctcacaggccgatgcgccggagattgacggcaat
gtcttcctccgcaatgttagcgcgcaactggctgtgggcgatattgttgatgccgtgatc
gaagatgctgacgagcatgatttatttggtgcctgcgctgtttag
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