Phenylobacterium parvum: HYN04_12030
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Entry
HYN04_12030 CDS
T05485
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYN04_12030
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phb01007
]
HYN04_12030
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phb03016
]
HYN04_12030
Enzymes [BR:
phb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HYN04_12030
Amino acid related enzymes [BR:
phb01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HYN04_12030
Transfer RNA biogenesis [BR:
phb03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HYN04_12030
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
TPR_4
tRNA-synt_1e
TPR_10
Motif
Other DBs
NCBI-ProteinID:
AWM78412
UniProt:
A0A2Z3HT34
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All DBs
Position
2570031..2571725
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AA seq
564 aa
AA seq
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MPAHTDLSRLVLPAREARSWPFEQARLLLDRILRLRLDDAGRDLAAALFAQGRPDEAVAA
LPVLREPVIFQCGYGASGLPHMGTFGEAARPTMVRTAFRALTGEAIPTRLIVFSDDMDGF
RKIPDNVPNREALELDRDKPVTSVRDPFGLYESFGAHNNARLRAFLDGFGFDYDFKSSTE
TYRSGELDAVLLRVLERFDAIQGVMLPTLGEERRATYSPFLPISPTTGRVLQVPTLERNV
EAGTIVFRDEDGTLTETPVTGGRVKLQWRPDWAARWVALGVDYEMSGKDLVDSVRVSNKV
ARILGGEPPEAFHYELFMDENNQKISKSKGNGLTMEEWLRYGAPESLAYYMYQSPKSAKR
LYFDVIPKATDEYLQQLDAYNRVGAGANAPAIDNPAWHVHTGAPPAVGSPLSFSLLLNLV
SAADASTKEILWGFIARYMPGADAASQPLLDRLADYAIHYYEDFVKPSKRFRAPDERERA
AMADLAARLRALPAGCQDAELIQAEVYEAGKAAGFEPLRLWFGALYEVLLGQSQGPRFGS
FAAIFGLDRTVGLIERALAGELAS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccacaccgacctttcccggctcgtccttcccgcccgcgaggcccgctcctgg
cccttcgagcaggcccgcctcctgctggacaggatcctccgcctgcgcctcgacgacgcc
ggccgcgacctcgccgccgccctgttcgcccagggccgcccggacgaggccgtcgccgcc
ctgcccgtcctgcgcgagcccgtcatcttccagtgcggctacggcgcctcgggactgccg
cacatgggcaccttcggcgaggccgcccggccgaccatggtgcgcaccgccttccgcgcc
ttgacgggcgaggccatccccacccgcttgatcgtcttctccgacgacatggacggcttc
cggaagatccccgacaacgtcccgaaccgcgaggcgctggagctggaccgggacaagccg
gtgaccagcgtccgcgaccccttcggcctctacgagagcttcggcgcccacaacaacgcc
cgcctgcgcgccttcctcgacggcttcggcttcgactacgacttcaagtcctccaccgag
acctaccggtccggagagctggacgccgtgctcctgcgggtgctggagcgcttcgacgcc
atccagggggtcatgctgcccaccctgggcgaggagcggcgggccacctattcgcccttc
ctgcccatcagccccacgaccggccgggtcctgcaggtccccaccctggagcgcaatgtc
gaggccgggaccatcgtcttccgcgacgaggacgggaccctgaccgagaccccggtgacc
ggcggccgcgtcaagctgcagtggcggccggactgggcggcccgctgggtggccctgggt
gtggactacgagatgtccggcaaggacctggtggactccgtgcgggtgtccaacaaggtg
gcgaggatcctcggcggcgagcctcccgaggccttccactacgagctcttcatggacgag
aacaaccagaagatctccaagtccaagggcaatggcctgaccatggaggagtggctgcgc
tacggcgcgcccgagagcctcgcctactacatgtaccagtcgcccaagtcggccaagcgg
ctctatttcgacgtcatccccaaggcgacggacgagtacctgcagcagctggacgcctac
aaccgggtcggcgccggggccaatgcgccggccatcgacaaccccgcctggcacgtccac
accggcgcgccgccggcggtgggctcgcccctgtccttctccctgctcctgaacctggtg
tcggccgccgacgcctcgaccaaggagatcctgtggggcttcatcgcccgctacatgccg
ggcgccgacgccgccagccagcccctgctggaccggctggccgactacgcgatccactac
tacgaggacttcgtgaagccctcgaagcggttccgcgctccggacgaacgggagcgggcc
gccatggccgacctcgccgcccggctgcgggccctgcccgccggctgccaggacgccgag
ctcatccaggccgaggtctatgaggccggcaaggcggcgggcttcgagccgcttcgtctc
tggttcggcgccctctacgaggtgctgctgggccagagccagggcccgcgcttcggctcc
ttcgcggccatcttcggcctcgaccggacggtgggactgatcgagcgcgccctggccggc
gagctcgcctcctga
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