Pedobacter heparinus: Phep_0786
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Entry
Phep_0786 CDS
T00978
Name
(GenBank) polysaccharide lyase family 8
KO
K19049
chondroitin AC lyase [EC:
4.2.2.5
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Phep_0786
Enzymes [BR:
phe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.5 chondroitin AC lyase
Phep_0786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_8_N
Lyase_8
Lyase_8_C
Motif
Other DBs
NCBI-ProteinID:
ACU03008
UniProt:
Q59288
Structure
PDB
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All DBs
Position
928098..930200
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AA seq
700 aa
AA seq
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MKKLFVTCIVFFSILSPALLIAQQTGTAELIMKRVMLDLKKPLRNMDKVAEKNLNTLQPD
GSWKDVPYKDDAMTNWLPNNHLLQLETIIQAYIEKDSHYYGDDKVFDQISKAFKYWYDSD
PKSRNWWHNEIATPQALGEMLILMRYGKKPLDEALVHKLTERMKRGEPEKKTGANKTDIA
LHYFYRALLTSDEALLSFAVKELFYPVQFVHYEEGLQYDYSYLQHGPQLQISSYGAVFIT
GVLKLANYVRDTPYALSTEKLAIFSKYYRDSYLKAIRGSYMDFNVEGRGVSRPDILNKKA
EKKRLLVAKMIDLKHTEEWADAIARTDSTVAAGYKIEPYHHQFWNGDYVQHLRPAYSFNV
RMVSKRTRRSESGNKENLLGRYLSDGATNIQLRGPEYYNIMPVWEWDKIPGITSRDYLTD
RPLTKLWGEQGSNDFAGGVSDGVYGASAYALDYDSLQAKKAWFFFDKEIVCLGAGINSNA
PENITTTLNQSWLNGPVISTAGKTGRGKITTFKAQGQFWLLHDAIGYYFPEGANLSLSTQ
SQKGNWFHINNSHSKDEVSGDVFKLWINHGARPENAQYAYIVLPGINKPEEIKKYNGTAP
KVLANTNQLQAVYHQQLDMVQAIFYTAGKLSVAGIEIETDKPCAVLIKHINGKQVIWAAD
PLQKEKTAVLSIRDLKTGKTNRVKIDFPQQEFAGATVELK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattatttgtaacctgtatagtctttttctctattttaagtcctgctctgctt
attgcacagcagaccggtactgcagaactgattatgaagcgggtgatgctggaccttaaa
aagcctttgcgcaatatggataaggtggcggaaaagaacctgaatacgctgcagcctgac
ggtagctggaaggatgtgccttataaagatgatgccatgaccaattggttgccaaacaac
cacctgctacaattggaaactattatacaggcttatattgaaaaagatagtcactattat
ggcgacgataaagtgtttgaccagatttccaaagcttttaagtattggtatgacagcgac
ccgaaaagccgcaactggtggcacaatgaaattgccactccgcaggcccttggtgaaatg
ctgatcctgatgcgttacggtaaaaagccgcttgatgaagcattggtgcataaattgacc
gaaagaatgaagcggggcgaaccggagaagaaaacgggggccaacaaaacagatatcgcc
ctgcattacttttatcgtgctttgttaacgtctgatgaggctttgctttccttcgccgta
aaagaattgttttatcccgtacagtttgtacactatgaggaaggcctgcaatacgattat
tcctacctgcagcacggtccgcaattacagatatcgagctacggtgccgtatttattacc
ggggtactgaaacttgccaattacgttagggataccccttatgctttaagtaccgagaaa
ctggctatattttcaaagtattaccgcgacagttatctgaaagctatccgtggaagttat
atggattttaacgtagaaggccgcggagtaagccggccagacattctaaataaaaaggca
gaaaaaaagaggttgctggtggcgaagatgatcgatcttaagcatactgaagaatgggct
gatgcgatagccaggacagatagcacagttgcggccggctataagattgagccctatcac
catcagttctggaatggtgattatgtgcaacatttaagacctgcctattcttttaatgtt
cgtatggtgagtaagcggacccgacgcagtgaatccggcaataaagaaaacctgctgggc
aggtatttatctgatggggctactaacatacaattgcgcggaccagaatactataacatt
atgccggtatgggaatgggacaagattcctggcataaccagccgtgattatttaaccgac
agacctttgacgaagctttggggagagcaggggagcaatgactttgcaggaggggtgtct
gatggtgtatacggggccagtgcctacgcattggattacgatagcttacaggcaaagaaa
gcctggttcttttttgacaaagagattgtatgtcttggtgccggtatcaacagcaatgcc
cctgaaaacattaccactacccttaaccagagctggttaaatggcccggttataagtact
gcaggtaaaaccggccggggtaaaataacaacgtttaaagcacagggacagttctggttg
ttgcacgatgcgattggttattactttcctgaaggggccaaccttagtctgagtacccag
tcgcaaaaaggcaattggttccacatcaacaattcacattcaaaagatgaagtttctggt
gatgtatttaagctttggatcaaccatggtgccaggccagaaaatgcgcagtatgcttat
atcgttttgccgggaataaacaagccggaagaaattaaaaaatataatggaacggcaccg
aaagtccttgccaataccaaccagctgcaggcagtttatcatcagcagttagatatggta
caggctatcttctatacagctggaaaattaagcgtagcgggcatagaaattgaaacagat
aagccatgtgcagtgctgatcaagcacatcaatggcaagcaggtaatttgggctgccgat
ccattgcaaaaagaaaagactgcagtgttgagcatcagggatttaaaaacaggaaaaaca
aatcgggtaaaaattgattttccgcaacaggaatttgcaggtgcaacggttgaactgaaa
tag
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integrated database retrieval system
