Providencia heimbachae: NCTC12003_03904
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Entry
NCTC12003_03904 CDS
T05509
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
phei
Providencia heimbachae
Pathway
phei00540
Lipopolysaccharide biosynthesis
phei01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC12003_03904 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
phei01005
]
NCTC12003_03904 (rfaF)
Enzymes [BR:
phei01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
NCTC12003_03904 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
phei01005
]
Core region
NCTC12003_03904 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
SQH15868
LinkDB
All DBs
Position
1:4216674..4217675
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AA seq
333 aa
AA seq
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MSQSLYRTIKALHPHAQIDVMAPQWCRPLLAKMPEISNAIPMPLGHGVLAIGERRQLGIQ
LRQNNYDQAIVLPNSLKSALVPFFAKIAKRTGWRGEMRYGLLNDIRPLDKHAFPLMVQRY
VALAYDKQSIKSAADIPTPILWPKLVTDKQDVSEAALVFKIDNTRPIIGFCPGAEFGPAK
RWPHYHYAALAEKLISEKGYQVLLFGSQKDNDAGEEIRHSLTDNARQHCHNLAGKTSLEQ
AVNLIDACQAVVSNDSGLMHVAAALDKPLVALYGPSSPDFTPPLSDKAEVIRLITGYHKV
RKGDGDSGYHQSLIDIQPQLVIDALIRLNIGIE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaagcctttatcggaccataaaggcgctacatcctcatgctcaaattgacgtg
atggcgcctcaatggtgtcgtcctttattggctaaaatgccggaaattagcaacgcgatt
ccgatgccattagggcatggagtgctagctatcggtgaacgtcgtcaattagggattcaa
cttcgtcaaaataactacgaccaagcgatcgttttacctaattctctaaagtccgcttta
gtgccttttttcgccaaaattgccaaaagaactggctggcgtggtgaaatgcgttatggc
cttctcaatgatattcgcccattagataaacatgcttttccattgatggtgcagcgctat
gttgccctcgcctatgataagcaaagtattaaatctgccgctgatatcccgacaccaata
ttgtggcctaaattagttacagataaacaagatgttagcgaagcggcccttgtattcaag
attgataatactcgaccaattattggtttttgccccggtgctgaatttggcccagcaaag
cgttggccacactatcattatgctgctctagcagaaaaattgatcagcgagaaaggctac
caagtcctgttatttggttctcaaaaagataatgatgcaggggaagagattcgtcacagc
ttaacagataatgcaaggcagcattgccataacctcgcaggaaaaacatcattagaacaa
gcggttaatcttatcgatgcctgccaagcagtagtcagcaatgattccggtttaatgcat
gttgccgcggctctcgataagccattagtggcgctttacggcccgagtagccctgatttt
acccctcccttatctgataaggctgaagttatccgcttaattaccggctaccataaagtc
cgtaaaggtgatggcgatagcggttatcatcaaagcttaattgatattcagcctcaattg
gttatcgatgcattaatacgcttaaatataggtattgaataa
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