Pseudomonas hydrolytica: NLY38_06110
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Entry
NLY38_06110 CDS
T08519
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
phf
Pseudomonas hydrolytica
Pathway
phf00053
Ascorbate and aldarate metabolism
phf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
NLY38_06110 (garD)
Enzymes [BR:
phf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
NLY38_06110 (garD)
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
UTH32882
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Position
1322762..1324318
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AA seq
518 aa
AA seq
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MQLIPHQDSPRYIRLHPSDNVGVVVNDQGVAAGGQFDDGLTAIEGIPQSHKVALVDIAEG
HEVVRYGEVIGYALKSIAAGSWVTEQVLCMPEPPVLDNLPKATIKATPGEPLEGYTFEGF
RNPDGSVGTRNILGVTTTVQCVVGVLDHVVERVRKEVLPKYPNVDDVVALSHSYGCGVAI
NAPDAVVPIRTLYNISRNPNLGGQALVISLGCEKLQANQLMDGDQLTNGMDEEDWLFRLQ
DSGTGFTGMVEQIMGMIEDRLQVLDQRRRETVPASELVVGMQCGGSDAFSGITANPALGV
AADLLVRAGATVMFSENTEVRDGIHLLTPRAASVEVADALIREMDWYDAYLARGMADRSA
NTTPGNKKGGLNNIVEKAMGSIAKSGSSLIAGVASPGERIRGKGLWFCATPASDFICGTL
QLAAGMNLHIFTTGRGTPYGLSMVPVIKVATRSQLAERWPDLIDVDAGQIVSGRMTLEEM
GWHIFQLYLDVASGRRQTCAERLRLHNDLVLFNPAPVT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgattccccatcaggattcgccccgttacatccgcctgcacccgagcgacaac
gtcggcgtggtggtcaatgaccagggcgtggccgctggcggtcagttcgatgatggtctg
acggctatcgaaggcatcccgcagagccacaaggtggcgctggtggatatcgccgaaggg
cacgaggtggtgcgttatggcgaggtcatcggttatgcgctcaagtccatcgccgccggc
agctgggtgaccgagcaggtactgtgcatgccggagccgcccgtgctggacaacctgccc
aaggcgaccatcaaggccacgccgggcgagccgctggaaggctacaccttcgaaggtttc
cgaaatccggatggcagcgtcggcacgcgcaatatcctgggtgtgaccaccaccgtgcag
tgcgtggtcggtgtgctcgatcacgtggtcgagcgcgtgcgcaaggaagtgctgcccaaa
taccccaacgtcgacgatgtggtggcgctgtcgcacagctacggctgcggcgtggcgatc
aacgcgccggacgccgtggtgccgatccgcaccctgtacaacatcagccgcaaccccaac
ctgggtggccaggcattggtgatcagcctcggctgcgaaaagctgcaggccaaccagttg
atggatggcgaccagctcaccaacggcatggacgaggaagactggctgttccgcctgcag
gattccggcactggcttcaccggcatggtcgagcagatcatgggcatgatcgaggaccgt
ctgcaggtgctcgaccagcgtcgccgcgagaccgtaccggcgtccgagctggtggttggc
atgcagtgcggcggcagcgatgccttttccggcatcaccgccaatccggccctgggcgtg
gccgccgacctgctggtgcgcgccggcgccaccgtgatgttctccgagaacaccgaagtg
cgtgacggcatccacctgctcacgccgcgcgccgccagtgtagaggtggccgatgcgctg
atccgcgagatggactggtacgatgcctaccttgcgcgcggcatggccgatcgcagtgcc
aacaccacgccgggcaacaagaagggcgggctgaacaacatcgtcgagaaggccatgggt
tccatcgccaagtccggcagcagcctgattgccggcgtcgcctctccgggcgagcgcatt
cgtggcaagggcctgtggttctgcgctacgccggccagcgacttcatctgcggcaccctg
caactggcggcggggatgaacctgcatatcttcaccaccgggcgcggcacgccgtacggc
ctgtcgatggtgccggtgatcaaggtggccacgcgcagccaactggccgagcgttggccg
gacctgatcgacgtcgacgccgggcagatcgtttccgggcgcatgacgctggaggaaatg
ggctggcatatcttccagctctatctggacgtggccagcgggcgcaggcagacctgcgcc
gaacgcctgcgtctgcataacgatctggtgctattcaacccggcgccggtgacctga
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