Pseudonocardia sp. HH130630-07: AFB00_15565
Help
Entry
AFB00_15565 CDS
T04486
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh00020
Citrate cycle (TCA cycle)
phh00640
Propanoate metabolism
phh00660
C5-Branched dibasic acid metabolism
phh01100
Metabolic pathways
phh01110
Biosynthesis of secondary metabolites
phh01120
Microbial metabolism in diverse environments
phh01200
Carbon metabolism
Module
phh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AFB00_15565
00640 Propanoate metabolism
AFB00_15565
00660 C5-Branched dibasic acid metabolism
AFB00_15565
Enzymes [BR:
phh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
AFB00_15565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ANY07475
UniProt:
A0A1B1ZP33
LinkDB
All DBs
Position
3190644..3191819
Genome browser
AA seq
391 aa
AA seq
DB search
MDLYEYQAKDLFAAHGVPVLPGKTVDNAAAAAAAADELGTAVVVKAQVKTGGRGKAGGVK
LAENAAEAQEKAGAILGLDIKGHTVHQVLVTEASDIAEEYYFSFLLDRSNRTFLAMCSAE
GGMEIEELAVERPEALARIPIDPIAGVDKAKADEIVAAGKIPAAVADEAATVIVKLWETF
VAEDATLVEVNPLVRDPQDKVIALDGKVTLDENAGFRHPDHEQLVDERTENPLEAKAKAK
GLNYVKLDGGQVGIIGNGAGLVMSTLDVVAYAGEAHGGVKPANFLDIGGGASAQVMADGL
DVILGDDEVKSVFVNVFGGITACDAVANGIVEALKILGDDATKPLVVRLDGNNVVEGRQI
LADANHPLVTVVATMDDAAAKAAELANAAGA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtggacctgtacgagtaccaggcgaaggacctcttcgccgcgcacggagtcccggtcctt
ccggggaagaccgtggacaacgccgccgctgcggcggccgcggcggacgagctgggcacc
gcagtcgtggtcaaggcccaggtcaagaccgggggccggggcaaggccggtggcgtgaag
ctggccgagaacgcggccgaggcgcaggagaaggccggggcgatcctcggcctggacatc
aagggccacacggtgcaccaggttctggtgaccgaggccagcgacatcgccgaggagtac
tacttctcgttcctgctggaccggtccaaccggacgttcctggccatgtgctcggccgag
ggcggcatggagatcgaggagctggccgtcgagcgcccggaggcgctggcccggatcccg
atcgacccgatcgccggggtcgacaaggcgaaggccgacgagatcgtcgccgcggggaag
atcccggccgccgtcgccgacgaggccgcgaccgtgatcgtgaagctgtgggagaccttc
gtcgccgaggacgcgaccctggtcgaggtcaacccgctggtccgggacccgcaggacaag
gtgatcgccctcgacggcaaggtcaccctggacgagaacgccgggttccggcaccccgac
cacgagcagctggtcgacgagcgcaccgagaacccgctcgaggcgaaggccaaggccaag
ggcctgaactacgtcaagctcgacggcggccaggtcggcatcatcggcaacggcgcgggt
ctggtcatgtcgaccctcgacgtcgtcgcgtacgccggtgaggcgcacggtggcgtgaag
ccggccaacttcctcgacatcggcggcggcgcctcggcgcaggtcatggccgacggcctg
gacgtcatcctgggcgacgacgaggtcaagagcgtcttcgtcaacgtcttcggtggcatc
accgcgtgcgacgcggtcgcgaacggcatcgtcgaggcgctgaagatcctcggcgacgac
gcgaccaagccgctggtcgtccggctggacggcaacaacgtggtcgagggacgccagatc
ctcgccgacgcgaaccacccgctggtcacggtggtcgccacgatggacgacgcggccgcg
aaggccgcggagcttgcgaacgccgcgggagcctga
DBGET
integrated database retrieval system
