Pseudonocardia sp. HH130630-07: AFB00_28590
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Entry
AFB00_28590 CDS
T04486
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phh
Pseudonocardia sp. HH130630-07
Pathway
phh03030
DNA replication
phh03410
Base excision repair
phh03420
Nucleotide excision repair
phh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFB00_28590
03410 Base excision repair
AFB00_28590
03420 Nucleotide excision repair
AFB00_28590
03440 Homologous recombination
AFB00_28590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phh03032
]
AFB00_28590
03400 DNA repair and recombination proteins [BR:
phh03400
]
AFB00_28590
Enzymes [BR:
phh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFB00_28590
DNA replication proteins [BR:
phh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AFB00_28590
DNA repair and recombination proteins [BR:
phh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AFB00_28590
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFB00_28590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_2
ERp29_N
Motif
Other DBs
NCBI-ProteinID:
ANY09542
UniProt:
A0A1B1ZUY5
LinkDB
All DBs
Position
complement(6044575..6047379)
Genome browser
AA seq
934 aa
AA seq
DB search
MSPATRTTAKGAAPGPESAGAATRPRLLLLDGHSLAYRAFFALPAENFRTGTGQTTNAVY
GFTSMLINLLRDEEPTHLAVAFDVSRTTFRSERYTEYKANRSATPDDFRGQIDLIKEVLA
ALNIPVFAVEGYEADDLIATLATQAEQRGFGVLITTGDRDAFQLVTDDVTVLYPKRGVSD
LGRIDPAEVDKRYGLTPTQYPDFAALRGDPSDNLPSIPGVGEKTAAKWVREFGSLAELTD
RVDEVKGKAGDNLRANLANVLLNRQLTELVRDVDLGSEPEQLELRPWDRDAVHRLFDELE
FRVLRERLFATLSSAEPEAESGFEISAEIVEPGAARAWLAANARDGRRIALGFAGVTGPV
AGRDVAGIALAVGEPTVEQRAAGATAGVPKAGYLALAGLTPDDEQALGDWLADPSVPKAA
HDVKAVLHALRSRGWSLAGLTSDTALAAYLARPGQRTFDLADLALRYLRRELRTEEPADG
QLSLLGGVDEADAQAAEKEMLAASAIAELADALDTELAERGGTELLSGVELPLAFVLADC
EAAGIAVDSEALSDLESDFGGQVRDAAQNAYRVIGKEINLGSPKQLQVVLFDELEMPKTK
RTKTGYTTDADALQSLYEQTGHEFLQFLLQHRDATRLKVTVDGLMKSVAEDGRIHTTYSQ
TIAATGRLSSTDPNLQNVPIRTAAGRRIRDTFVVGSGPGGAPYTELMTADYSQIEMRIMA
HLSEDAALIEAFRSQHDFHAETAARVFGVDAAAVSVEQRAKIKAMNYGLAYGLSAYGLSG
QLRISTEEAKGLMDDYFAGFGGVRDYLAGVVDQARKDGYTATILGRRRYLPDLTSDNRQR
REMAERMALNAPIQGSAADIIKVAMLGVHRALQTENLHSRVLLQVHDELVLEVAEGEREP
LEALVRREMAAAAELSVPLEVSVGYGRSWDSAAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgccacccgaaccacagcgaagggcgcagcgccgggccccgagagcgccggc
gccgcgacccgtccccgcctgctgctgctcgacggccattcgctggcctaccgggcgttc
ttcgcgctgcccgcggagaacttccgcaccggcaccggtcagaccaccaacgcggtctac
ggcttcacctcgatgctgatcaacctgctgcgcgacgaggagccgacccacctggcggtg
gcgttcgacgtctcccgcacgacgttccggtccgagcggtacaccgagtacaaggcgaac
cgctcggccacgccggacgacttccgcggccagatcgacctcatcaaggaggtactggcc
gcgctgaacatcccggtgttcgcggtcgagggctacgaggcggacgacctcatcgccacc
ctggccacgcaggccgagcagcggggtttcggggtgctcatcaccaccggtgaccgggac
gcgttccagctggtgaccgacgacgtcacggtgctgtacccgaagcgcggggtgtccgac
ctcggccggatcgacccggcggaggtcgacaagcgctacggcctcaccccgacccagtac
cccgacttcgcggcgctgcgcggggacccgtcggacaacctgccctcgatccccggggtg
ggggagaagaccgcggccaagtgggtgcgcgagttcggctcgctcgccgagctgaccgac
cgggtcgacgaggtgaagggcaaggcgggtgacaacctgcgggcgaacctggcgaacgtc
ctgctgaaccggcagctcaccgagctggtgcgcgacgtcgacctcggctccgagccggag
cagctcgaactgcggccgtgggaccgcgacgcggtgcaccggctgttcgacgagctggag
ttccgggtgctgcgcgagcgcctgttcgccaccctgtcctccgccgagccggaggccgag
tccgggttcgagatctccgcggagatcgtcgagccgggtgcggcgcgggcctggctggcg
gccaacgcccgcgacggccggcggatcgccctcggtttcgccggtgtcaccggcccggtg
gcggggcgcgacgtcgcgggcatcgcgctcgccgtcggcgagccgaccgtggagcagcgg
gcggccggcgcgacggccggcgtcccgaaggccgggtacctggcgctggccggactgacc
ccggacgacgagcaggcgctgggcgactggctggccgacccctcggtgccgaaggccgcg
cacgacgtgaaggcggtgctgcacgcgctgcgctcgcgcggctggagcctggccgggctg
accagtgacaccgcgctcgcggcgtacctggcccggcccgggcagcggaccttcgacctg
gccgatctcgcgttgcggtacctgcgccgggagctgcggaccgaggagcccgcggacggt
cagctgtcgctgctcggcggggtcgacgaggccgacgcccaggccgcggagaaggagatg
ctcgccgcgtcggccatcgccgaactggcggacgcgctcgacaccgagctcgccgagcgc
ggcggcaccgagctgctgtcgggggtcgagctgccgctggcgttcgtgctggccgactgc
gaggcggccgggatcgcggtcgactccgaggcgctctcggacctggagtccgacttcggc
gggcaggtccgcgacgccgcgcagaacgcctaccgggtgatcggcaaggagatcaacctc
ggctcgccgaagcagctgcaggtcgtgctgttcgacgagctggagatgccgaagaccaag
cggaccaagaccggctacaccaccgacgcggacgcgctgcagagcctctacgagcagacc
ggtcacgagttcctgcagttcctcctgcagcaccgggacgcgacccggctgaaggtcacc
gtcgacgggctgatgaagtccgtcgccgaggacggccggatccacaccacctactcgcag
acgatcgcggcgacggggcggttgtcctcgaccgacccgaacctgcagaacgtgccgatc
cggaccgcggcgggccgccggatccgggacacgttcgtcgtcggctccggtcccggcggt
gcgccctacaccgagctgatgaccgcggactacagccagatcgagatgcggatcatggcg
cacctgtccgaggacgcagcgctgatcgaggcgttccgttcccagcacgacttccacgcc
gagaccgcggcccgggtgttcggtgtcgacgcggccgcggtgtcggtcgagcagcgcgcc
aagatcaaggcgatgaactacggcctggcctacggcctgtcggcgtacggcctgtccggg
cagctgcggatctccaccgaggaggccaagggcctcatggacgactacttcgccggtttc
ggcggggtgcgcgactacctcgcgggcgtcgtcgaccaggcccgcaaggacggctacacc
gccaccatcctcggccgccgccgctacctgcccgacctgaccagcgacaaccggcagcgg
cgcgagatggccgagcggatggcgctgaacgcaccgatccagggcagcgcggcggacatc
atcaaggtcgccatgctgggggtgcaccgggcgctgcagaccgagaacctgcacagccgg
gtcctgctccaggtgcacgacgagctggtgctcgaggtcgccgagggcgagcgggagccg
ctggaggccctggtccgccgggagatggcggccgcggccgagctgtcggtgccgctggag
gtctcggtcggctacggccgcagctgggactccgcggcccactag
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