Pseudopodoces humilis (Tibetan ground-tit): 102105000
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Entry
102105000 CDS
T02921
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510
Focal adhesion
phi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102105000
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102105000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
102105000
NCBI-ProteinID:
XP_014106979
LinkDB
All DBs
Position
Unknown
AA seq
1995 aa
AA seq
DB search
MPPPRLTASGSRHVPAAPCREPRERGASGSPAHEAPFCLPAGPTVPPGGRGVPGLPTPGR
PGLRGRAGGGGLQAEGIGSDIPDGAWHSLYQLWWGIAWLCAWXCVCDSPPELLRWALHVI
SXGLSDPTAPDSSCCPRKAPSCQCWGVHPGLHGRGRGRRGHXAALHPMPYPAPYCSAISV
FHQADPVVAHGPLGTCSPPGCYPATGNLLVGRATRLSATSTCGLDGPQEYCIVSHLQDSE
KCFTCDSRDPSLPESHRIENVIYLSSPHDQRTWWQSENGVEHVSIRLDLEGEFHFTHLIM
KFKTFRPAAMLVERSADFGRTWKVYRYFAYNCSKLFPGIPNHPSGLVDEVLCDQRYSEIE
PSSHGEVIFKVLDPSIPVADPYSPDIQNLLRVTNLRVNLTKLHTLGDNLLDSRREVLHKY
YYAVDELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGRCVCEHHTQGLNCERCEDFYH
DLPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRHCHLC
KPFYYRHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQCRCKENVAGPRC
DRCRHGAYGLSHGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVAGRSCSQCVPEF
WGLSYDLGGCRPCACDFGGAYNNRCSMEDGACPCRPHIMGRQCDQVQPGFFCAPLDYYTY
EAEQATGHGHSHPQLPGAIRAEVPQDCLEYDTREPAGRKGRSRHQHNPPHAPQPPVPLRR
SRQQPPKPDVEEVVRDSAGCMVTWTGLGFARVRDGAGLTFRVDNVPYPMDYELLLRYEPE
SAEDWEAVVSVSSRALPTSSRCGNLLPSEQLYRQSLPHSQRYVLLSRPFCFEPSTPYEVT
MRLQRASVTQRHPGAFILIDSLVLLPQVSELPGFHGAEAAVRQEELERYQCLEVFRMAPP
HPLAQACARLVCSFSALMHGGALPCQCDPQGSRSSECQVQGGQCECKPHVIGRRCDHCAP
GSYGFGPLGCSPCTCSPEGSVSQLCDQVSGQCRCQPGTVGRQCDQCQPSHWGFPACRPCQ
CNGHTEECDPRMGTCLHCRDHTSGRHCERCQDGYYGNPVLGSGQQCRPCPCPGYPGTRNY
HGSACHADAETHHIVCLCAPGYAGPRCDRCSPGYFGSPEMEGGECRPCQCNNNIDASDPE
GCDPHTGQCLRCLYHTAGPRCAQCQPGYYGNALQHSCRRCVCDPRGTLASHCTDGTCDCD
HGTGACACRPNVVGKSCDRCAPHFWRLGGPGGCEPCGCHPTHALHPACDTVTGQCQCRPG
FGGRVCSQCQEHHWGDPEQECRACECEPLGSESPQCEQDNGQCRCRLGFGGLRCDRCQRG
YQEPFPHCSPCHPCFGRWDLAVGSLQEGLRRLGAQVQALREGSSALPLSPRRLRELEEAL
GHVERLLGEGDSPGGPLLDGLPRQLGGTRMELDNFWKHLQELEQHLDQLAQMDMQHHDRL
AELSRELGGLNRTTSHLQILLSTVAAAGFSESYRSILASMETSQQAEVVANGTAGELSRA
QMTQRATERALRQWGNTFRRGTAAARKSLRETQKRVMGLSITRINEKICGAPGDRSCKHA
SCGGALCRDRAGTRHCGGTGCAGVLPISARALSSAHNASQQLEVALGQLGVVTQKMQEVQ
ELARGARSWAEEALGRSQAARSHAEKATAQLRDFIRRIKAFLAEEGADPGSIELVARQVL
NISLPSSPGQIQELLLEMQESIGQLEGVDAVLNSTAEGLAVARDLLTQGQEARQRAEGVR
DELVGTQQALEVARTQVRTVGSTLQSTRDAIQVAENRAREAERRLRVLDRKELQAQRRLR
ELAQRITALQEHSRDARHMAQQAKDGAQRATTTSGTLSQDLAQVTQRYVVLKNRVGMLDR
VSGGALQRLSQLMAEAQDLLDKASNSKRKLEDLEQRFGANERTMAAKVTRLQVLEQQVTG
LLLDIRERANAYATC
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccccacgcctcactgccagtggcagcaggcacgttcctgccgcgccgtgccgg
gagcccagggaacgcggtgcctctggctcgccagcccacgaggcgcccttttgtttgccg
gcggggcccaccgtgccgcccgggggccggggcgtgcccgggctgccgacgcctggccgg
cctggcctccgcgggcgggcgggcggcgggggcctccaggcagaaggaatcggcagtgac
attcccgatggggcatggcacagtttgtaccagctctggtggggcatagcatggctgtgt
gcctggnngtgtgtgtgtgacagtcccccagagctgctcaggtgggcactgcatgtcatc
tcangaggactttcagacccaactgcccctgattcctcgtgttgtccccggaaagcacca
tcatgccagtgctggggggtgcatcctggactgcacggtcgtggtagaggcaggagagga
catncagctgccctgcaccccatgccataccctgcaccctactgcagtgccatctccgtg
ttccaccaggcagatcccgtggttgcccatggacctcttggcacttgctctcctcctggc
tgctacccagccactgggaacctgctggtggggcgagccacccgcctgagtgccacctct
acctgtgggctggatgggccccaggagtactgcatcgtcagccacctccaggactcggag
aaatgtttcacctgtgactcacgtgacccgtccctgcctgagagccaccgcatagagaat
gtcatctacctaagcagcccccatgaccaacggacctggtggcagtcagagaatggtgtg
gagcatgtcagcatccgcctggatctggagggcgagttccacttcacccacctcatcatg
aagtttaaaaccttccgccccgcggccatgctggtagagcgctcagcagactttgggcgc
acctggaaggtgtaccgctactttgcctacaactgctccaagctcttccctggaatcccc
aaccacccttcagggctcgtggatgaagtgctgtgtgaccagcgctactctgagatcgag
ccctccagccatggggaggtcatcttcaaagtgctggacccctccatccctgtggcagat
ccctatagcccagacatccagaacctgcttcgcgtcaccaacctgcgggtgaacctcacc
aagctgcacacactgggtgacaacctgctggactcacggcgggaggtgctgcacaagtac
tactacgctgtggatgagctggtgctgcgtgggagctgcttctgccacggccacgctgcc
cactgtgccccagcaccgggtgccccgacaccctctgtccccggcatgatccatgggcgc
tgtgtgtgcgagcaccacacacaggggctgaactgcgagcgctgcgaggacttctaccat
gacctgccctggcgcccggccgagggctccagcaccaacgcctgtcgccgctgtgactgc
aacgagcactcacggcggtgccactttgacatggccgtgttcctggccacggggaacacc
agtggggctgtgtgtgatggctgccagcacaacaccatgggccgccactgccacctctgc
aagcctttctactaccggcaccctcgctctgacatccggtcccccactgcctgtgccccg
tgcgattgtgacccggcaggctcactggatggaggtgcctgcgacgggcacacggacgtg
gcgctgggcatgattgcggggcagtgccgctgcaaggagaatgtggccggtccccgctgt
gaccgctgccggcacggcgcctatggcctcagtcatggcgacccacagggctgccagcca
tgcaggtgtgacccacggggtacagtggcaggcagctccccgtgtgaccccatcagtggg
gactgctactgcaaacgctttgtggctgggcgctcctgcagccagtgtgtgcctgaattc
tggggtctgagctacgacttggggggctgccggccctgcgcctgtgacttcgggggagcc
tacaacaaccggtgctccatggaggatggtgcatgtccctgccgtccccacatcatgggg
cggcagtgtgaccaggtacagcccggcttcttctgtgcccccctcgactactacacttat
gaggctgagcaggccaccggccatggccacagccaccctcagctcccgggtgccattcgg
gcagaggttccccaggactgcctggagtatgacacgagggagccggcagggcggaaggga
cgctcacggcatcagcacaaccccccccatgctccccagccccctgtccccttgcgccgc
agccgccagcagccccccaagccggatgtggaggaggtggtgcgggacagtgccgggtgc
atggtgacgtggacaggcttggggtttgcccgggtgcgggacggggctggcctgaccttc
cgtgtggacaacgtgccctaccccatggactacgagctgctgctgcgctatgagcccgag
tcagccgaggactgggaggccgtggtcagtgtcagctcccgtgcgctgcccaccagctct
cgctgtggaaacctgctgccctccgagcagttgtaccgccagagtctgccccacagccag
aggtatgtgctgctctcccggcccttctgcttcgagcccagcaccccttatgaggtgaca
atgcggcttcagcgggccagtgtcacccagcgccaccctggtgccttcatcctcatcgac
tcgctggtgctcctgccgcaggtatcagagttaccagggttccatggggcagaggcagca
gtgcgccaggaggagctggagcggtaccagtgcctggaggtgtttcgcatggccccccct
catcccctggcccaggcctgtgcccgcctggtctgcagcttctcagccctgatgcacggc
ggggcactgccctgccagtgcgacccacagggctcccgcagcagcgagtgccaggtacag
ggcgggcagtgtgagtgcaagccccacgtcatcggccgacgctgtgaccactgtgcccca
ggcagctacggctttgggcccctgggatgcagcccctgcacctgctccccagagggctca
gtgtcccagctgtgcgaccaggtgagcgggcagtgccggtgccagcctggcaccgtgggc
cggcagtgtgaccagtgccagcccagccactggggcttccctgcctgccggccctgccag
tgcaatgggcacactgaggaatgcgacccccggatgggcacctgtctgcactgccgcgac
catacgagcggacggcattgtgagaggtgccaggatggttactatgggaaccctgtgctg
ggctcggggcagcagtgccggccctgcccctgccccggctaccctggcacacggaattac
catgggagcgcctgccatgccgatgctgagacacaccacatcgtctgcctctgtgcccct
ggatatgcagggccccgctgcgaccgctgctcccctggttactttgggtctccagagatg
gaggggggggagtgccggccctgccagtgcaacaacaacatcgatgccagcgacccagag
ggctgcgacccccacacgggccagtgcctgcgctgcctgtaccacactgctgggccacgc
tgtgcccagtgtcagcctggctactacggcaatgccctgcagcacagctgccggcgatgt
gtctgtgacccacggggtacactggcctcccactgcaccgatggcacctgcgattgtgac
catggcacaggagcctgtgcctgccgccccaacgtcgtgggcaagagttgtgatcgctgt
gcaccccacttctggaggctggggggcccagggggctgtgagccctgtggctgccacccc
acacatgccctgcaccctgcctgtgacacagtgacagggcagtgccagtgccggcctggc
ttcgggggtcgtgtctgttcccagtgccaggagcaccactggggagaccctgagcaggag
tgccgagcctgtgagtgtgagccgctgggttctgagagcccacagtgcgagcaggacaac
gggcagtgccggtgccgcctgggattcggggggctgcgctgtgaccgctgccagcggggc
taccaggagccctttccccactgctctccctgccacccttgctttgggcgctgggacctg
gccgtgggcagcctgcaggaaggactgcggcgccttggggcacaggtgcaggccctgagg
gaggggagttccgcactcccactcagcccccgtcgcctgcgggaactggaggaggctctg
gggcacgtggaacggctgctgggagagggggacagccctggtggtcccctcctcgatgga
ctgcccaggcagctgggtggcaccaggatggagctggacaacttctggaagcacctccaa
gagctggagcagcatctagatcagctggcgcagatggatatgcagcaccatgaccggcta
gctgagctgagccgtgagctgggaggtctcaaccgaaccacctcccaccttcaaatcctc
ctcagcactgtagcagcagctgggttcagcgagtcttaccgcagcatcctggcatcgatg
gagacctcgcagcaggcagaggtggtggccaacggcacagctggcgagctaagtagggcg
cagatgacacagagggcaacagagcgtgctttgcggcagtggggcaatactttccgccgt
ggcacagccgcagcccggaaatccttgcgggagacacagaaacgggtgatgggactcagc
attaccaggatcaatgagaagatttgtggggcacccggagaccggagctgcaagcatgca
tcttgcggaggagccttgtgccgagacagagcggggacaaggcattgcggtggcactggg
tgtgcaggggtactgcctatctcagctcgagccctgagcagtgcccacaatgcctcacag
cagctggaggtggcattagggcagctgggtgttgtgacacagaagatgcaggaggtgcag
gagctggcacggggggcacgcagctgggcagaggaggcactggggcgctctcaggccgca
cgcagccatgcagagaaggcgacggcccagctgagggactttatccgccgaatcaaggcc
ttcctggcagaggagggagctgacccaggcagcattgagctggtggcccggcaggtgctg
aacatctccctgcccagcagccccggacagatccaggagctgctcttggagatgcaggag
agcattggccagctggagggggtggacgcagttctcaacagcacagcggaggggctggct
gtggcacgggatctgctgacacagggacaggaggccaggcaacgagcagaaggcgtaagg
gatgagctggtggggacacagcaggcactggaggtggcacggacacaagtgaggacagtg
gggagcaccctgcagagcaccagggatgccatccaggtggctgagaacagagccagggag
gcggagcgcaggctgcgggtgctggacaggaaggagttgcaggcgcagaggcggctgcgg
gagctggcacagcgcatcactgccctgcaggagcacagccgggatgctcgccacatggcc
cagcaagccaaggacggggcacagcgtgccaccaccacctcggggacacttagccaggac
ctggcacaggtaacacagcgttatgtggtgctgaagaaccgggtgggcatgctggacaga
gtgtctggtggggccctgcagcgcctgtcacagctgatggcagaggcccaagacctcctg
gataaagccagcaacagcaagaggaagctggaagacctggagcagcgctttggggccaat
gaaagaacgatggcggcaaaggtgacacgactgcaagttttggagcagcaagtcaccggg
ctgttgctggacatccgggagagggccaacgcttacgccacttgctag
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