Pseudopodoces humilis (Tibetan ground-tit): 102108893
Help
Entry
102108893 CDS
T02921
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04020
Calcium signaling pathway
phi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102108893 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102108893 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phi04040
]
102108893 (GRIN1)
Ion channels [BR:
phi04040
]
Ligand-gated channels
Glutamate (ionotropic)
102108893 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
102108893
NCBI-ProteinID:
XP_005527204
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISGQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFR
SITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPWSQDSPGKLPPHSERPSAHHHPSCT
ASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctcctcttctcctcgtccttcgcccgcgcc
ggctgcgacccgaagatcgtcaatatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aacgccacctccgtcacccacaagcccaacgccatccagatggccctgtccgtctgcgag
gacctcatctccggccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacctgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattccgataagagcatccacctgtcctttttgcgcacg
gtcccaccttactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aaccacgtcattctgatagtcagcgacgaccacgagggtcgtgctgcacaaaagaagctg
gagaccctcctggaggagaaagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaccct
ggaaccaaaaatgtgacatcgctgctgctggaggcgaaggagctggaagccagggtgatc
atcctctctgccagcgaggatgacgcggccacggtgtacagatcagcggccatgctcaac
atgacgggctcgggctacgtgtggctggtgggggagcgggagatctcgggcaatgccctg
cgctacgccccggacggagtgatcggcctgcagctcatcaatggcaagaacgagtcagcc
cacatcagtgatgctgtggccgtggtggcccaggccgtgcatgacctgtttgagaaggag
aatatcacagacccaccgcggggctgcgtgggcaacaccaacatctggaaaacaggacct
ctttttaagagggtgttgatgtcctccaagtactcagagggtgtcaccggacgggtggag
ttcaacgaggacggggacaggaagtttgccaactacagcatcatgaacctgcagaatcgg
aaactggtccaggttgggatttacaatggcagcaatgtcctgaccaacgacaggaagatc
atctggccagggggggaaacggagaaacctcaaggctatcagatgtcaaccaagttgaag
attgtgaccatccaccaagagccttttgtgtatgtgaagcccactcaggcagatgggacg
tgcagggaggaattcaccatcaatggagatcctgtcaaaaaggtcttctgcactggaccc
aatgagaccatcccaggccgtcccacggtggcactgtgctgctacggcttctgcatcgac
ctgctcatccgcctggcaggggtgatgaacttcacctatgaggttcacctggtggctgat
ggtaaatttggtacccaagagcgggtgaacaacagcaacaagaaggagtggaacgggatg
atgggggagctgctgagcggccaagcagacatgatcgtggctcccctcaccatcaacaat
gagcgggctcagtacattgagttctccaagcccttcaagtaccagggcctcaccatcctc
gtgaagaaggaaatcccccgcagcaccctggactcgttcatgcagcccttccagagcacg
ctctggctgctggtggggctgtctgtgcacgtggtggcagtgatgctgtacctcttagac
cgattcagcccatttggccggttcaaagtaaacagtgaggaggaggaggaagatgccctg
actctctcctcagccatgtggttctcctggggagtcctgctgaactctggcattggagaa
ggtgctccccggagtttctctgcccgtatccttggcatggtgtgggctggctttgctatg
atcattgtggcctcatacactgccaacctggcagccttcctggtgttagaccgacctgag
gagaggatcacaggcattaacgacccccggctgcgcaacccctcggataaattcatctac
gccacggtgaagcagagctccgtggacatctacttccgacggcaggtggagctgagcacc
atgtacaggcacatggagaagcacaactacgagagcgctgccgaggccatccaggcagtg
agggacaacaagctccacgccttcatctgggactcggcagtgctggagtttgaggcctcc
cagaagtgtgacctggtgacgacgggggagctcttcttccgctccggcttcgggatcggg
atgcgcaaggacagcccctggaagcagaacgtctccctggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaagagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagagatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgttcgcggccgttaatgtgtggaggaaaaac
ctgcaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccacttttagg
tccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaggatacgccc
tgcagaatggtccctcaggagtgccagagagacaggctggcaccatggagccaagacagc
cctgggaagcttccaccccactctgaacgtcctagcgcccaccatcacccgagctgcaca
gcctctccgcggcacatcatccccaccgccccaggaggagatgcatgtgttccccatagg
cagctcctgcaactcgagtag
DBGET
integrated database retrieval system
