Paenibacillus hunanensis: SK066_14365
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Entry
SK066_14365 CDS
T09633
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
phk
Paenibacillus hunanensis
Pathway
phk03030
DNA replication
phk03430
Mismatch repair
phk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SK066_14365
03430 Mismatch repair
SK066_14365
03440 Homologous recombination
SK066_14365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phk03032
]
SK066_14365
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_14365
Enzymes [BR:
phk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SK066_14365
DNA replication proteins [BR:
phk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SK066_14365
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SK066_14365
BRITE hierarchy
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
DNA_pol3_a_NII
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
HHH_3
T2SSK
STI1-HOP_DP
SCAN
Motif
Other DBs
NCBI-ProteinID:
WPP39800
LinkDB
All DBs
Position
complement(3562552..3566871)
Genome browser
AA seq
1439 aa
AA seq
DB search
MSASGERRQRFELLMKQAEVPASLMEPYFADGAIEQVEVSRTNKEWKLIIAKETLVPSVT
YRTFCRHIQDKMAHIAKIRFRFHYSESVDPVQIIEEYWSLFLEWVQREIPSVNGWMTRAK
FALAGDVLTLTMSDNMALELAKKKQIDQAIVKFYDDYFNIALRIKIEVGESSSEDVQAFH
EKRRQEELQEIERIMTSMESELEEEVDEDGEPVRLQVGYEIKEPAVPLQELQDEEKKIIV
QGTIFGLDSKELRNGSTLFTFFITDFTDSLQMKMFAKTKDDLKIMSLLANGKWVKARGRV
EYDRFMQIPELAMIPSDLSEIKAPPGRKDDAAEKRVEFHLHTTMSTMDAVTTIDKYVKTA
ADWGHPAIAVTDHGGVQCYPEAAKAAKKHGVKLIYGLEANVVNDSTEIVLNPQPLELKTA
TYIVFDIETTGLSITQNKIIEIAAVKMQDGKEIDRYATFVDPHERIPYNIQQLTNITDEM
VRGAPEIDGVIREFVQFAGDDILVAHNARFDIGFIQATLKNHDLPEMTNPVLDTLELARL
LYPTLKNHRLNTLAAKYKVALESHHRAIDDTIALGGILFGLLKDAEQERRLTRLDRLNDF
VGQDLSNARPFHCTVYALNEQGKKNLFKLVSLSHTEYFKRVPRIPKSVLTQYREGLIVMS
GCEKGEFFETVLNKTLEEAEEVAQFYDVLEIQPLTMYMHLVDKGLVGTPRELEIAVQKIV
DLGVKLDKPVVATGNVHYLEPREKIFRDITINGITGFSPLKDQRKPDAHFRTTNEMLDEF
KFLGEEKAYEVVVTNTQALAERFEVYPLFPDKLFTPNLEGADEEIRNTCYATARSIYGEE
LPEVVVARLEKELEPIIKYGFSANYLISEKLVKKSNEDGYLVGSRGSVGSSIVATFLGIS
EVNPLPAHYICVNSECRHSEWFLDGSVPSGFDLPEKECPNCGGRLKGEGQDIPFETFLGF
KGDKVPDIDLNFSGDYQPIAHNYTKILFGEKNVFRAGTIGTVAEKTAYGFAKKYEELHQK
KWRGAELSRLAAGCTGVKRSTGQHPGGIVVVPDYIDVEDVTPVQYPADDTSAEWKTTHFD
YHAFEANLLKLDILGHDDPTMMRMLQDLTGVDPTTIPMNDPKVMSMFNSTEALGISPHQL
RSPVATYGVPEMGTKFVRQMLVESQPTSFADLLQISGLSHGTGVWLGNAQELIKNGTCSI
KTVIGCRDDIMLFLIYKAGMDASLAFKITESVRKGKGLTTEWIDEMKRCKVPQWYIDSCL
KIQYMFPKAHASAYVISAVRTAYFKLYHPIEYYATYFTVRAEDFDIDLCCQGYEAIYRKI
EEIEQLGFQASPKEKAMLSILEMALEMTARGFTFKPLDLYRSHATSFTVDGKSLIPPFSA
VQGIGDNAARNIAASREHGEFLSIEDFQQKSKASKTIVELMTQMGCFRGLPESNQLSLF
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaagcggagaaagaagacaacgttttgagctgctgatgaaacaggctgaagtg
cctgccagtctgatggagccctattttgcggatggagcgatcgagcaagtggaggtcagc
cgcacgaataaggaatggaaactgatcattgccaaggagacactggtaccctcggtaacc
tatcggaccttttgtcggcatattcaggacaagatggcacatatcgcgaaaatacggttt
cgttttcactatagcgagtcggttgatccggtacagattattgaggaatactggtcgctg
tttctggagtgggtacagcgcgagattccatcggtcaatggctggatgacacgggcgaag
tttgctctggcaggcgatgtgcttacactcacgatgagtgataatatggcgctggagcta
gcgaagaagaagcagatcgatcaggcgatcgtcaaattttacgacgattattttaatata
gcactacgtatcaaaatcgaagtaggcgaaagctcctccgaggatgtacaggcgtttcat
gaaaaacggcgccaggaggaattgcaggagattgaacggatcatgaccagcatggaatct
gagctggaggaagaagtggacgaggatggcgagccagttcgtctacaggtcggttatgag
attaaggagcctgctgtaccattgcaggagcttcaggatgaagagaagaagattatcgtt
caaggtacgatcttcggtctcgatagcaaggagctacgtaatggcagcaccctgttcacg
ttctttattacagactttaccgattcgttgcaaatgaagatgtttgcgaagacgaaggac
gatttgaaaattatgagcctgcttgctaatggcaaatgggtgaaagcgcgtggacgtgtt
gagtatgaccgttttatgcaaattccagagctggcaatgattccgtccgatctgtcagaa
atcaaagctccaccaggacgcaaggacgatgctgctgaaaagcgtgtcgaattccatctg
catacgactatgagcacgatggatgcggtaacgacgattgataaatatgtaaaaacggct
gccgattggggacatcctgcgattgcagtgacagaccatggcggtgtgcaatgttaccct
gaggctgctaaagcagcgaaaaagcatggtgtgaagctaatctacggtctggaagccaat
gtcgtgaacgactcgaccgagattgtactgaatccacaaccactagaattgaaaacagcg
acttacatcgtattcgatattgagacgacaggtttgtcgattacacaaaataaaattatc
gagattgcagcggtgaaaatgcaggatggcaaggaaattgatcgctatgccacctttgtt
gatccccatgagcgcattccatacaatatccagcaattgaccaatattaccgatgaaatg
gtacgcggtgcaccggagattgatggggttattcgtgaatttgtacaatttgctggagac
gatatactggttgcgcacaatgcgcgttttgatattggttttatccaggcaacattaaaa
aatcacgatctgcctgagatgacgaatccggttctcgatacgctcgagctggctcgttta
ctctatccaacgctgaaaaatcaccgtctgaatacactggctgccaagtataaagtggca
ctggaaagtcatcaccgtgcgattgacgatacgattgcactgggtggtattctgtttggc
ttactcaaagatgcagagcaggagcgacgcttgactcgtttggatcgactgaatgatttt
gtcggtcaggatctatctaatgcgcgtccattccattgcaccgtatatgcactgaatgag
cagggcaagaaaaatctgttcaagcttgtatcgctgtcgcatactgaatatttcaagcgt
gtaccgcgtataccgaagtccgttctgacacagtatcgtgaaggcttgattgtgatgtca
ggctgtgagaagggcgagtttttcgaaacggtattaaataagacgctggaagaagccgaa
gaggttgcacagttttacgatgtactggaaattcagccactgacgatgtatatgcatctg
gtcgataaagggctggtcggtacaccacgtgaactggagattgcggtgcaaaagatcgtt
gatctgggtgtgaagctggataagcctgtagtagcaacgggcaatgtgcattatctggag
ccacgagagaaaattttccgtgatattacgattaacgggattaccggctttagtccgctt
aaagatcagcgtaagccagatgcccatttccgtacgaccaatgaaatgctcgatgagttt
aagttccttggtgaggaaaaagcctacgaggttgtagtgacgaatacgcaggcactggca
gagcgcttcgaggtatatccactgttcccggataagctgttcacgccgaatctggaaggt
gcagatgaggagattcgtaacacctgctatgcgacagcacgctcgatctacggtgaggaa
ttgcctgaggttgtagtcgctcgtctggaaaaggaattggagcctattattaaatacggt
ttctccgccaactatctcatttcggagaagctcgttaaaaagtccaatgaagacggctat
ctggtcggttcacggggctcggtcggctcatcgatcgttgcgaccttcctcggcatttcc
gaggttaatccgctgcctgcccattatatctgcgtgaattcggaatgcagacatagcgaa
tggtttctggatggtagcgtaccgagtggattcgacttgccagagaaggaatgtccgaac
tgtggcggtcgtctcaagggtgaaggacaggatattccgtttgagacgttccttggcttt
aagggcgataaagttcccgatatcgacttgaacttttccggtgattatcagccgattgcc
cataactatacgaagatcctatttggtgagaaaaacgtattccgtgcgggtaccatcggt
acggttgcagagaaaaccgcctatggctttgccaagaaatatgaagagctgcaccaaaag
aaatggcgcggtgccgagctcagtcgccttgctgctgggtgtactggcgtaaagcgtagc
actggacagcatcccggcggtatcgtcgttgtgcctgactacattgatgtagaggatgtt
acacctgtacaatatccggctgatgatacaagcgctgagtggaaaacgacgcattttgac
tatcacgcctttgaagcgaatctgctcaagctcgatattctcggtcatgatgatccgacg
atgatgcggatgctacaggatttgactggggtcgatccaacaacgattccgatgaacgat
ccgaaagttatgagcatgtttaactcgactgaagcgctgggcatttcaccgcatcagctg
cgcagtccagttgccacatatggagtaccggagatggggacaaagttcgtacgtcagatg
ctggtggaatcacagccgacaagctttgccgatttgctgcaaatctccggtctatcccat
ggtactggcgtatggctcggtaatgcacaggaattgatcaaaaacggcacctgctcgatc
aaaacagttatcggctgtcgtgacgatattatgctattcctgatctacaaagcgggtatg
gatgcaagtctggcttttaaaattacggagagtgtgcgtaaaggtaaaggtctgacaaca
gaatggatcgatgagatgaagcgctgcaaggtgccacaatggtacattgattcctgtctc
aaaatccagtatatgttcccgaaggcgcacgcatcggcttacgttatctccgctgtgcgt
acagcctactttaagctgtatcatccgattgaatattatgcgacctactttacggttcgt
gcagaggactttgatattgatctatgctgtcagggctatgaagcgatctatcgcaaaatc
gaagagatcgagcagctcggcttccaggcatcaccgaaggaaaaggcaatgctgtccatt
ctcgaaatggcactggaaatgacagcacgaggtttcacattcaagccgctcgatctgtat
cgttcgcatgcaacctcctttacagtcgatggcaaaagtcttattccaccgttctctgcc
gtacaggggattggtgataatgcggctcgcaatatcgctgcttctcgtgagcatggcgag
ttcctatcgattgaggatttccagcagaaatccaaagcaagtaagacgattgtggagctg
atgacgcagatgggttgcttccgcggtctgccagaaagtaaccagttgtcactgttttaa
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integrated database retrieval system
