KEGG   Pelagibacterium halotolerans: KKY_562
Entry
KKY_562           CDS       T01645                                 
Name
(GenBank) proline dehydrogenase (proline oxidase) / delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
phl  Pelagibacterium halotolerans
Pathway
phl00250  Alanine, aspartate and glutamate metabolism
phl00330  Arginine and proline metabolism
phl01100  Metabolic pathways
phl01110  Biosynthesis of secondary metabolites
Module
phl_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:phl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    KKY_562
   00330 Arginine and proline metabolism
    KKY_562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phl03000]
    KKY_562
Enzymes [BR:phl01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     KKY_562
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     KKY_562
Transcription factors [BR:phl03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    KKY_562
SSDB
Motif
Pfam: Pro_dh Aldedh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: AEQ50603
UniProt: G4RBU0
LinkDB
Position
complement(552208..555876)
AA seq 1222 aa
MPESRTCPFEAFSDRPLKIDTGLREAITSAYRLPETEIVPGLLDAAAVEPQKARAIHATA
EKAVRGIRAKGNGGGVEGLMHEYALSSQEGIALMCLAEALLRTPDNSTRDLLIADKIAPG
NWQKHLGLDRSVFVNAATWGLVVTGKLVTPVDESGLSNALSRIVARSGEPVIRAGVKMAM
RMLGEQFVAGQDIAEALKNARSWEAKGFGYSYDMLGEAATTAHDAERYMAEYVGAIHAIG
KASAGKGPYGGPGISIKLSALHPRYARTKYDRVMAELLPRLKELAALAKSYDIGLNIDAE
EMDRLELSLDLLEALATDPAYDGWHGIGFVVQAYSKRCPFVLDWIIDLARRSGHRIMVRL
VKGAYWDSEIKRAQIDGLEDFPVFTRKVHTDVSYIACAKKLLAARELVFPQFATHNAQTM
ATIYELAGPDFEVGSYEFQCLHGMGEPLYEQVVPKDKLSRPCRIYAPVGSHETLLAYLVR
RLLENGANSSFVNQIADEDVPVDRLIADPVEIARQVSPVGAPHEQIDLPKDILAAGRRNS
RGIDLSNEQILRALEKSLKAGAERAWVAKAEDATGEARSVLNPADHRDVVGEVIEPSVDQ
IDAIMARAQRAAPGWAATPPAERGAMLMRAAGAMESQMEIFMSLAMREAGKTAANAIAEV
REAVDFLRYYGQQVKESFANDTHVPLGPVVCISPWNFPLAIFTGQMSAALVAGNPVIAKP
AEETPLIAQLAVDLMHAAGVPADVLQFAPGDGKVGAALVGHGATCGVMFTGSTEVARLIQ
NQLAGRTLANGTPVPLVAETGGQNALVVDSSALTEQVVLDVLASAFDSAGQRCSALRVLC
LQDEIADKTLEMLKGAMGQLDIGNPDRLTVDVGPVITAEARDGIDGHIKSMRDKGHAITQ
LDLPALAENGTYVPPTLIELDDLSELGREVFGPVLHVVRFKRKHLDGLLEKINALGYGLT
FGLHTRIDTTIAEVSSKIEVGNIYVNRNQIGAVVGVQPFGGHGLSGTGPKAGGPLYLRRL
VRTTSQTVWGLPARQAGPTLVTLAEWLRGNSRDDLAEVTLNYASHPAINAFSELDGPVGE
RNTYMTKPKGKVALSARTLTGLVHGLAAGLAAGNDMLVKASGDLGSVVRELPEDIRQRIE
VVREIGPDAARAVLVEGDGETVTAISKSVAEWDGPIVTVQGASSEALERGEAVFAIDLLV
DEVSTSINTAAAGGNASLMALA
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgccggaatcccgcacctgcccttttgaagcgttttcggatcgtccgctcaagatcgac
accggattgcgcgaagcgatcacttcggcctaccggctgccggaaaccgaaatcgtcccc
ggactgctcgatgccgctgcggttgaaccgcaaaaggccagggccattcacgccacggca
gaaaaggccgtcagaggcatccgtgccaagggcaatggcggcggggtcgaagggctcatg
catgaatatgcgctatcgagccaggagggcattgcgctcatgtgtcttgccgaagcgctg
ttgcggacgccggacaattccacccgcgaccttctgattgccgacaagattgcgcccggc
aactggcagaaacatctcgggctcgatcgctcggtgttcgtcaacgcggcgacctggggg
ctggtggtgaccggcaagcttgtgacgcccgtcgatgaatcaggattgtccaacgcgctg
tcgcggatcgtcgcgcggtcgggcgagccggtgatccgggccggcgtgaagatggcgatg
cgcatgctgggggaacagttcgtcgccggccaggatatcgccgaagccctcaagaacgcc
cgatcatgggaggccaagggattcggctattcctacgacatgctgggagaagcagcgacg
accgcccatgacgcggagcggtacatggccgaatatgtcggggcgatccatgccatcggc
aaggcttcggcgggcaagggaccctatggagggccgggcatctcgatcaagctttcggcg
ctgcacccgcgctatgcccggaccaagtatgatcgtgtgatggcagagctgctgccgcgg
ctcaaggaactggcagcgctggccaaatcctatgacatcgggctcaacatcgacgccgag
gagatggaccggctcgaactctcgctcgatctgctcgaagcgctggccaccgatccagcc
tatgatggctggcacggcatcgggtttgtcgtgcaggcttattccaagcgctgccccttc
gttctggactggatcatcgatctggccagacgctcggggcaccggatcatggtgcgtctg
gtcaagggcgcctattgggacagcgagatcaagcgcgcgcagatcgacgggctcgaagat
tttccggtgttcacccgcaaggtgcataccgatgtgagctatatcgcctgcgccaagaag
ctgctggcggcgcgcgaattggtgtttccgcagtttgcgacgcacaacgcgcagaccatg
gcgacgatttatgaattggccggacccgactttgaggttggcagctatgaatttcagtgt
ctgcacggcatgggcgagccgctttacgagcaggtggtgcccaaggacaagctgagccgt
ccctgccgcatctatgcgcctgtggggagccacgagacgctgctggcctatctggtgcgg
cggctgctcgaaaatggcgccaattcgagcttcgtcaatcagatagccgacgaggacgtg
cccgtggatcggctgattgccgatccggtggagattgcacggcaggtctctccggttggc
gcgccccatgagcagatcgatctgcccaaggacattctggccgccggacggcgcaactcg
cgcgggatcgatctgtccaacgagcagatattgcgggctttggaaaagagcctcaaggcg
ggcgccgaacgggcgtgggtggcaaaggccgaggacgcgacgggcgaagcccggtccgtt
ctcaatcctgccgatcatcgcgacgtggttggcgaggtgatcgagccttcggtggaccag
atcgacgccatcatggccagggcacagcgcgcagccccgggatgggcggcaacgcccccc
gccgaacgcggcgcgatgctgatgcgggcggcgggcgccatggaaagccagatggaaatc
ttcatgtccctggccatgcgcgaggccggcaagacggcggccaatgccattgccgaagtg
cgcgaagccgtcgatttcctgcgctattatggccagcaggtcaaagagagcttcgccaat
gacacccatgtccccctcggaccggtggtgtgcatttcgccttggaatttcccgctggcc
atctttaccgggcagatgtcggcagcgctggttgcgggcaatccggtgatcgccaaacca
gccgaggagacgccgctgatcgcccaattggctgtggatctgatgcacgcggcgggtgtc
ccggccgatgtgctgcagtttgctccaggggacggcaaggtgggtgctgcgctggtcggg
catggggcgacatgcggagtgatgtttaccgggtcgaccgaagtggcacggcttatccag
aaccagcttgccggccggacactggccaatggcacgccggttccgctggtggcggaaacc
gggggacagaatgcgctggttgtcgattcttcggcgctgaccgaacaggtcgtgcttgac
gttctcgcttcagcattcgacagcgcgggccagagatgttccgcactgcgtgtgctttgc
cttcaggacgagatcgccgacaagacgctcgagatgctcaagggcgcgatggggcagctc
gatatcggcaaccccgacaggctgaccgtggatgtcggtccggtgataaccgccgaagcg
cgcgacgggatcgatggccacatcaaatccatgcgcgacaagggccacgccatcactcaa
ctcgatctgccggcactggcggaaaacggaacctatgtccccccgacactgatcgagctc
gatgatctatcggagctggggcgggaagtgttcgggccggtgctgcatgtggtgcggttc
aagcgcaagcatctcgatggcctgctcgagaagatcaatgcgctcgggtatgggctgaca
tttggactgcacacacgcatcgacaccacgattgcagaagtctcatccaagatcgaggtg
ggcaatatctacgtcaaccgcaatcagatcggcgccgtggtgggcgtgcagccattcggt
gggcacggactgtcaggcaccgggccgaaggccggtgggccgctttatctgcgccggttg
gtgcgaacaaccagccagacggtctggggattgccggcacggcaggcgggtccgacgctg
gtgacgctggcggagtggctgcgcggcaacagccgggatgaccttgccgaggtcacgctg
aactatgccagccatccggccatcaatgcgttttccgaactggacgggccggtgggtgag
cgcaacacctatatgacaaagcccaagggcaaggttgcgctcagcgccaggacactgacc
gggctggtgcatgggcttgcggccggactggcggcgggcaatgacatgctggtcaaggca
tcgggtgatctgggatcggtggtccgggagttgcccgaagacataaggcagcgcatcgaa
gtggtgcgggagatcggtccggacgcggctcgcgcggtgctggtggaaggtgacggtgag
accgtgaccgcgatcagcaaatccgttgcggaatgggatggcccgatcgttaccgttcag
ggggcatcttcggaagcactggagaggggcgaggcggtgtttgccatcgacctgctggtc
gatgaggtttcgaccagcatcaacacggcagcggcggggggcaatgcaagcctgatggcg
ctggcgtaa

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