Pseudomonas hormoni: KJF94_06275
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Entry
KJF94_06275 CDS
T09556
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
phom
Pseudomonas hormoni
Pathway
phom00071
Fatty acid degradation
phom00280
Valine, leucine and isoleucine degradation
phom00310
Lysine degradation
phom00362
Benzoate degradation
phom00380
Tryptophan metabolism
phom00410
beta-Alanine metabolism
phom00640
Propanoate metabolism
phom00650
Butanoate metabolism
phom00907
Pinene, camphor and geraniol degradation
phom00930
Caprolactam degradation
phom01100
Metabolic pathways
phom01110
Biosynthesis of secondary metabolites
phom01120
Microbial metabolism in diverse environments
phom01200
Carbon metabolism
phom01212
Fatty acid metabolism
Module
phom_M00087
beta-Oxidation
phom_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KJF94_06275 (fadB)
00650 Butanoate metabolism
KJF94_06275 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KJF94_06275 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KJF94_06275 (fadB)
00310 Lysine degradation
KJF94_06275 (fadB)
00380 Tryptophan metabolism
KJF94_06275 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KJF94_06275 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KJF94_06275 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KJF94_06275 (fadB)
00930 Caprolactam degradation
KJF94_06275 (fadB)
Enzymes [BR:
phom01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KJF94_06275 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KJF94_06275 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KJF94_06275 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KJF94_06275 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QVW25188
LinkDB
All DBs
Position
1363763..1365910
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVENFKLPDAELVAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVSRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVFEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaattcgtcgagaacttcaagctg
ccggatgcagagcttgttgcaggcaacctcgaagccaacaggattttcagcgatttcgaa
gacctcaacgtcccgactgtcgccgcgatcaacggcatcgctctgggtggcggtctggaa
atgtgcctggcggcggactaccgcgtcatgtccgctaccgcgaaaatcggcctgccggaa
gtcaaactgggcatctacccgggcttcggcggtaccgtgcgcctgccgcgcctcatcggt
gccgacaacgccatcgagtggattgccgcgggtaaggaaaaccgtgctgaagacgcgctg
aaagtcggcgctgtcgatgcagtggttgctcccgagaagctggcagaagcggcactgaac
ctgatcaaaggcgccatctccggcgaattcgattacaaagccaagcgtcagccaaagctg
gaaaaactcaagctcaacgccatcgaacagatgatgtcgttcgaaaccgccaaaggtttc
gtggctggtcaagcgggtccgaactacccggcaccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagcgctggaagtcgaagccgccggtttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggctgccgtattg
ggcgccggcatcatgggtggcggtatcgcttatcagtcggcttccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggcatcgagcaaggcctggctgaagccgccaagctg
ctggtgagccgcgttgataaaggtcgcatgacggcggcgaaaatggctgaagtgctcaac
ggcattcgtccaaccctgtcctacggcgacttcggtcacgtggatctggtggtcgaagcg
gtcgtcgagaacccgaaggtcaagcaagccgttctggccgaagtcgaagacaaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcaccttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgattcgtggcgagaagtccagcgagctggccgttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaaagtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacactggccaccacggtcgtgacgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgtcgttcggctgtcgacgtgctttacgaggccaagcgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagaagggcaagcag
aagaaagtcgccgatccgtcggtgctggaagtgctcaagccaatcgttttcgaacagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggtctggtctac
ggcattggtttccctccattccgtggcggtgcgctgcgttacatcgattcgatcggtgtg
gcagagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgcgaaatggccaaaaacggccagagcttcttcggttaa
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