Phormidium sp. PBR-2020: JWS08_17840
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Entry
JWS08_17840 CDS
T07578
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00270
Cysteine and methionine metabolism
phor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JWS08_17840 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phor03000
]
JWS08_17840 (dcm)
03032 DNA replication proteins [BR:
phor03032
]
JWS08_17840 (dcm)
03036 Chromosome and associated proteins [BR:
phor03036
]
JWS08_17840 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
phor02048
]
JWS08_17840 (dcm)
Enzymes [BR:
phor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
JWS08_17840 (dcm)
Transcription factors [BR:
phor03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
JWS08_17840 (dcm)
DNA replication proteins [BR:
phor03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
JWS08_17840 (dcm)
Chromosome and associated proteins [BR:
phor03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
JWS08_17840 (dcm)
Prokaryotic defense system [BR:
phor02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
JWS08_17840 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
UCJ14488
LinkDB
All DBs
Position
complement(4091100..4092608)
Genome browser
AA seq
502 aa
AA seq
DB search
MQQLNLFELEPVNLDPVPPSSPGAKFTFVDLFAGIGGFRIALERLGGQCLGYSEIDAEAI
AVYQKNFITPVGSSEGNLGNVQKIGKLPESVDLIVGGVPCQPWSIAGKIKGFDDNRGKLW
FDVIRIIEQNYPKAFIFENVKGLMEPRHRESLDSIVTELSQRGYEVTFQVLNSYDFGLPQ
DRDRIFIVGIQNTIKTQSEFRFPEPLGDKLRLYDCIEGVERRAIQKQKFPPERLFGDRIP
ASRGRFQKIDELNDFFLFSDVRDGHTTIHSWDLIETSEREKEICLTLLRNRRKKKYGPKD
ENPLRFEHLQKLIPDLAVEELEKLVEKKILRHVQSNTIFRDIGYTSDTEEGEQPFAPTDI
YGTTSEKCYNKYEFVNSKISAGINGVAKIILPHADAIGTLTATGMRDYVATCSLNCQDPN
SYKQEFIEKIYKPRKSKPISARDYARLQGFPDNFVMARREAIARKQFGNAVSVPVIYHLT
RSLLNVLSGFRINPSFLVRERG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcttaatctgtttgaattagagccagtaaatttagatccagtcccccccagt
tcgccaggtgctaaatttacctttgtcgatttatttgcggggattggcggctttagaatt
gccttggaacgcttggggggtcaatgtttggggtattcagaaattgatgccgaggcgatc
gccgtctatcagaaaaactttatcactcctgttggttcttctgaaggcaacttagggaat
gtacaaaaaattggcaagttaccggaatccgttgatctgattgtcggtggggttccctgt
cagccttggtcaattgcggggaaaattaagggatttgacgataatcgcggcaaactttgg
tttgatgtgattcggattattgaacagaattaccctaaagcctttatttttgaaaatgtt
aaaggtctcatggaaccccgccaccgtgagagtttagattcgattgtaaccgaactaagt
caacgaggctatgaggtcacgtttcaggttttgaattcctatgattttggcttaccccaa
gaccgcgatcgcatttttattgttggcattcaaaacaccatcaaaacccaatcagagttt
aggtttcctgaaccgttaggggacaagctgcgactctatgactgtattgagggggtagaa
cgtcgtgctattcagaaacagaaatttccgcctgagcgtttatttggcgatcgcatcccc
gcatcccgagggcgttttcaaaaaattgatgaactgaatgactttttcctcttttcagat
gtccgagatggccataccacgattcactcttgggatttaattgaaaccagcgaacgagaa
aaagagatttgtttgaccctacttcgcaatcgacgcaagaagaaatatggacccaaagat
gagaatccgttacgttttgagcatttacaaaagctgattcctgatttagcagttgaggag
ttggagaaactggtggagaaaaagatattacgtcacgttcaatctaacaccatttttcga
gatattggctatacatctgatactgaggagggcgaacagccgttcgcccctacagatatc
tatggtacgacttctgaaaaatgttataacaaatatgagtttgtcaattcaaaaatttcg
gcaggaatcaatggtgtggctaaaatcatcctccctcatgctgatgcgatcggcacttta
acggctaccggaatgcgagattatgttgcgacatgttcgttaaattgccaagaccccaac
agttacaaacaggagtttatcgagaagatttataagccaagaaaatctaaacccatttcg
gctcgtgattatgcccgattacaggggtttcccgataacttcgtgatggcgagacgagag
gccattgctcgtaaacagtttgggaatgcggtatcggttcctgtcatctatcatttgacg
cgatcgctcctgaatgtgttgtcaggcttcaggattaacccctctttcctcgtccgtgag
aggggttaa
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