Phaeobacter sp. LSS9: D1820_03510
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Entry
D1820_03510 CDS
T05617
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00240
Pyrimidine metabolism
phq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
D1820_03510
Enzymes [BR:
phq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
D1820_03510
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AXT34119
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All DBs
Position
complement(716292..717206)
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AA seq
304 aa
AA seq
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MIDMTFSAEVAAARASGQAIVALESTIITHGMPYPQNVEVAAQVEDDIRAAGAVPATMAV
IDGVLHIGLEADQLQALGQAKNVAKISRADMPACIATGGTGATTVAATMIAARLAGISVF
ATGGIGGVHKGAETSFDISADLMELAQTPVTVVAAGAKAILDIPKTLEVLETQGVPVIAY
GQDSIPAFWSATSDLAAPLRMDSAAEIARAHATRQAMDLPGGQLIANPIPAGDQIAAEDL
APVLAQAQSEADEQGVAGKAVTPFLLQRIFELTEGRSLTANIALVRNNARLAAEIAKELV
NLKQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacatgacattttccgccgaagtcgcagcagctcgcgcctccggtcaggccatc
gttgcgcttgaaagcaccatcatcacccacgggatgccctatccccaaaacgtcgaggtg
gccgcacaggtcgaggatgatatccgcgccgcgggtgccgttccggccaccatggccgta
atcgacggcgtgctgcacatcgggcttgaggcggaccaactgcaggcgcttggccaggcc
aagaatgtcgcgaagatttcgcgtgcggatatgcccgcctgtatcgccaccggcggcacc
ggcgccaccaccgttgcggcgaccatgatcgcggcccggctggccgggatcagtgttttt
gccactggcggcatcggcggcgtccataagggcgcagaaaccagcttcgacatttctgcc
gaccttatggaactggcgcaaaccccggttaccgtggtggccgcaggcgccaaggcgatc
ctagatatccccaaaacgcttgaggtgctggaaacccaaggcgtgccggtcatcgcctat
gggcaggacagcattccggcgttctggtcggcgacctctgacttggctgcccccctgcgc
atggacagcgccgcggagatcgcccgcgcccatgccacccgtcaggccatggacctgccc
ggcggacaactgatcgccaacccgatcccggcaggcgaccagatcgctgccgaagatctg
gcaccggttctggcgcaggcccagtccgaggcggatgagcaaggcgtcgctggcaaggcg
gtaacccccttcctgctgcaacgcatctttgagctgaccgagggccggtcactgaccgcc
aatattgcgcttgtgcgcaacaatgcccggctggccgctgaaatcgccaaggaattggtc
aacttgaagcaataa
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