Phaeobacter sp. LSS9: D1820_09330
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Entry
D1820_09330 CDS
T05617
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
phq
Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phq03009
]
D1820_09330 (rsmD)
Enzymes [BR:
phq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
D1820_09330 (rsmD)
Ribosome biogenesis [BR:
phq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D1820_09330 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
UPF0020
MTS
MethyltransfD12
Methyltransf_16
Methyltransf_25
Methyltransf_31
Met_10
PrmA
Motif
Other DBs
NCBI-ProteinID:
AXT35161
LinkDB
All DBs
Position
complement(1962135..1962689)
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AA seq
184 aa
AA seq
DB search
MRIIAGDFRGRALTSVGKGDAGAHLRPTTDRVRESLFNVLSHLVDFDGLRVLDLFAGTGA
LGLEALSRGAADAVFVDDGRVSQGLITKNIDLLRIKDRARLIRRDATRLPVNDGTPCDVI
FLDPPYGKSLGQKALIAATKGGWLAEDALVVWEESSPMQAPAGFTLHDSRKYGDTHITLL
WRES
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcatcgccggagatttccgaggccgcgcgctcaccagcgtgggcaagggggat
gcaggcgcccatctgcgccccactactgaccgggtgcgcgaaagcctgttcaacgtgttg
agccatctggttgatttcgatgggctgcgggtgctggatctgttcgcgggcaccggtgcc
ttggggcttgaggcgctgtcgcgcggcgcggcggatgcggtgtttgtcgatgatggccgg
gtctcacaggggctgatcactaagaacatcgacctgctgcggattaaggaccgcgcacgg
ctcatccgccgcgatgcaacccgcctgccggtcaatgatggcacgccttgtgatgtgata
ttccttgatccaccttatggtaaatcgctggggcagaaggcgctgatcgccgcgaccaaa
ggcggctggctggctgaggatgcgctggtggtctgggaagaaagcagccccatgcaagcc
cccgcaggatttaccctgcacgacagccgcaaatacggcgacacgcacatcaccctcttg
tggcgcgagagctga
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